RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 NIPAL3Q6P499 406 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 GRAMD2AQ8IUY3 354 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 BATF2Q8N1L9 274 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 TFAP2CQ92754 450 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 OR2B2Q9GZK3 357 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 GORASP2Q9H8Y8 452 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 PRELID1Q9Y255 219 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 V9GY05 133 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 FAM155AB1AL88 458 aaPredicted RBP17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 IFNA1P01562 189 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 GAAP10253 952 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 AGTR1P30556 359 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 DLSTP36957 453 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 HTR5AP47898 357 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 RBM12BQ8IXT5 1001 aaKnown RBP17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 ZFAND2BQ8WV99 257 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 MRPL33O75394 65 aaKnown RBP17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 OR1D5P58170 312 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 FRMPD2BQ6IN97 320 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 PARM1Q6UWI2 310 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 CCDC71LQ8N9Z2 235 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 TNFRSF13CQ96RJ3 184 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 ARNT2Q9HBZ2 717 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 HOXB5P09067 269 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 CSNK1DP48730 415 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 SIMC1Q8NDZ2 872 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 UTP4Q969X6 686 aaKnown RBP17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 NXPE3Q969Y0 559 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 GAREM1Q9H706 876 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 DYNLRB1Q9NP97 96 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 IGHG1P01857 330 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 BPHLQ86WA6 291 aaPredicted RBP17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 METTL4Q8N3J2 472 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 OR13H1Q8NG92 308 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 SLAMF9Q96A28 289 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 TCTN2Q96GX1 697 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 TXNDC15Q96J42 360 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 WDR83Q9BRX9 315 aaKnown RBP17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 LMF2Q9BU23 707 aaKnown RBP17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 MEGF11A6BM72 1044 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 BDKRB2P30411 391 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 CXADRP78310 365 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 S100A12P80511 92 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 TNFRSF17Q02223 184 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 LINC00346Q8IVM7 164 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 ARSGQ96EG1 525 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 SLAMF7Q9NQ25 335 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 TP53TG5Q9Y2B4 290 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 TMEM72A0PK05 275 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 TMEM202A6NGA9 273 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 UPK1BO75841 260 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 SSTR2P30874 369 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 RPS18P62269 152 aaKnown RBP17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 LSMEM2Q8N112 164 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 FRMD1Q8N878 549 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 GDPD1Q8N9F7 314 aa17.41■□□□□ 0.38
SMARCC1-201ENST00000254480 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 ARNTLO00327 626 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF593O00488 134 aaPredicted RBP17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF264O43296 627 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 FAM198BQ6UWH4 519 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 ESPNLQ6ZVH7 1005 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 ADIPOR2Q86V24 386 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 RETREG3Q86VR2 466 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 OR1J4Q8NGS1 313 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 RPL3LQ92901 407 aaKnown RBP17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 FKRPQ9H9S5 495 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 SPCS2Q15005 226 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF691Q5VV52 312 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 FAM234AQ9H0X4 552 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 H3BUI4 141 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 RAB40BQ12829 278 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 FCRLAQ7L513 359 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 MAKP20794 623 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 VASH1Q7L8A9 365 aaPredicted RBP17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 SLC16A14Q7RTX9 510 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF808Q8N4W9 903 aaPredicted RBP17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 PDXPQ96GD0 296 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 SUCNR1Q9BXA5 334 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 MCOLN1Q9GZU1 580 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 AKAIN1P0CW23 69 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 CX3CR1P49238 355 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 MRPS21P82921 87 aaKnown RBP17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 DCAF12Q5T6F0 453 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 DPY19L2P1Q6NXN4 242 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 TBCCD1Q9NVR7 557 aa17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
SMARCC1-201ENST00000254480 PAHP00439 452 aa17.39■□□□□ 0.38
SMARCC1-201ENST00000254480 CCL11P51671 97 aa17.39■□□□□ 0.38
SMARCC1-201ENST00000254480 SLC9A3R2Q15599 337 aa17.39■□□□□ 0.38
SMARCC1-201ENST00000254480 DNAJC5GQ8N7S2 189 aa17.39■□□□□ 0.38
SMARCC1-201ENST00000254480 WDR37Q9Y2I8 494 aa17.39■□□□□ 0.38
SMARCC1-201ENST00000254480 CRYBG1Q9Y4K1 1723 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 NUP98P52948 1817 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 BET1O15155 118 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 ZNF780AO75290 641 aaPredicted RBP17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 TSPAN15O95858 294 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 EVI2BP34910 448 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 KCNAB1Q14722 419 aa17.39■□□□□ 0.37
SMARCC1-201ENST00000254480 SLC6A19Q695T7 634 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms