RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CLLU1Q5K131 121 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 C1orf94Q6P1W5 598 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 FIGNL1Q6PIW4 674 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 TMPRSS12Q86WS5 348 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 CPOQ8IVL8 374 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC44A3Q8N4M1 653 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC38A5Q8WUX1 472 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 ELP4Q96EB1 424 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 MVB12BQ9H7P6 319 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 THSD1Q9NS62 852 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 HRASLS2Q9NWW9 162 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 BORCS7-ASMTA0A0B4J1R7 106 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 NPIPA7E9PJI5 369 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 NPIPA8P0DM63 369 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 CPT2P23786 658 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 VEGFCP49767 419 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 NR0B1P51843 470 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 RPS27AP62979 156 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 UBA52P62987 128 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 HOXC5Q00444 222 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 C19orf57Q0VDD7 668 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 RSU1Q15404 277 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 LPAL2Q16609 132 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 PRRT3Q5FWE3 981 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 CD276Q5ZPR3 534 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 TCTE3Q8IZS6 198 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 MBOAT4Q96T53 435 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 RNF32Q9H0A6 362 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 DUSP21Q9H596 190 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 ACKR4Q9NPB9 350 aa11.33□□□□□ -0.6
TSPAN9-201ENST00000011898 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 A0A1B0GVT2 93 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 C5orf67F2Z3F1 127 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 RGS11O94810 467 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 AHSA1O95433 338 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 CBX7O95931 251 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 SBK2P0C263 348 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 GKN3PP0CG01 181 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 NME1P15531 152 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 SOX9P48436 509 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PUM1Q14671 1186 aaKnown RBP eCLIP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PODNL1Q6PEZ8 512 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 ATCAYQ86WG3 371 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 MS4A15Q8N5U1 240 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 RBM7Q9Y580 266 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 TEX13DA0A0J9YY54 714 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 FOXE1O00358 373 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 GNSP15586 552 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 MSR1P21757 451 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PSMB5P28074 263 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 NAA10P41227 235 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 MC3RP41968 323 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 KIR2DL3P43628 341 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PSPHP78330 225 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PCGF3Q3KNV8 242 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 TMEM179BQ7Z7N9 219 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 LRRC28Q86X40 367 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 CDCA3Q99618 268 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 SULT4A1Q9BR01 284 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 RHNO1Q9BSD3 238 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 FZD3Q9NPG1 666 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 MIOXQ9UGB7 285 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 AK6Q9Y3D8 172 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 EP300Q09472 2414 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 ASPDHA6ND91 283 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC22A31A6NKX4 558 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF670-ZNF695F2Z2N8 137 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 FAM227AF5H4B4 570 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 HSPA12AO43301 675 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 AMY2AP04746 511 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 FURINP09958 794 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PRR35P0CG20 571 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PSMB1P20618 241 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 CST6Q15828 149 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC6A19Q695T7 634 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 CYHR1Q6ZMK1 362 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 USP51Q70EK9 711 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 GPR155Q7Z3F1 870 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF227Q86WZ6 799 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 SMARCD2Q92925 531 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 DGAT2Q96PD7 388 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 DOK1Q99704 481 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 SEMA4CQ9C0C4 833 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PELI2Q9HAT8 420 aa11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF629Q9UEG4 869 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 PUS1Q9Y606 427 aaKnown RBP eCLIP11.32□□□□□ -0.6
TSPAN9-201ENST00000011898 TMEM202A6NGA9 273 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 UNC119BA6NIH7 251 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 FBXO24O75426 580 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 SLCO2B1O94956 709 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 ADH1BP00325 375 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 RENP00797 406 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 AKR1C4P17516 323 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 ITGB7P26010 798 aa11.31□□□□□ -0.6
TSPAN9-201ENST00000011898 LSSP48449 732 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms