RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 M6prP24668 278 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Pde12Q3TIU4 608 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Ankrd13bQ5F259 626 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Abhd13Q80UX8 337 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Slitrk2Q810C0 846 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Dcaf12Q8BGZ3 453 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Ckap4Q8BMK4 575 aaKnown RBP19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Slc49a3Q8CE47 516 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Guca1bQ8VBV8 201 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr61Q8VGM2 311 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Nkx6-1Q99MA9 365 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Wdr89Q9D0R9 386 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Slc30a7Q9JKN1 378 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Prg4Q9JM99 1054 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Spin2-ps6A0A140T8V2 174 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Adam3F8VQ03 822 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 P01638 115 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Egr1P08046 533 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Ackr3P56485 362 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Hyal4Q05A56 481 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Fthl17dQ3SXD1 176 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Gm10696Q3UTC4 357 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Taar6Q5QD13 345 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 S100a15aQ6S5I3 108 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Cnih3Q6ZWS4 160 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Lrrc39Q8BGI7 337 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Ino80cQ8BHA0 191 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Rab15Q8K386 212 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Ndc1Q8VCB1 673 aaKnown RBP19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Slc5a2Q923I7 670 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 PsphQ99LS3 225 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Fthl17Q99MX2 176 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Srfbp1Q9CZ91 441 aaKnown RBP19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Pdzk1Q9JIL4 519 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Olfr71Q9QZ18 312 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Ptges3Q9R0Q7 160 aaKnown RBP19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Olfr1076A2AK60 313 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Zfp563B8JJZ9 448 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Vmn2r91E9Q2U5 856 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Gm17093F6XGJ4 214 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 PigfO09101 219 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 LynP25911 512 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Bglap3P54615 95 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Cdh5P55284 784 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Rnf224Q3UIW8 156 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 BpiQ67E05 483 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Syt16Q7TN83 639 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Gpatch2Q7TQC7 527 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Krr1Q8BGA5 380 aaKnown RBP19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Lypd4Q8BVP6 246 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 NagsQ8R4H7 527 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Aaed1Q9D1A0 226 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Trim2Q9ESN6 744 aaKnown RBP19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Abcb10Q9JI39 715 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Slco1a1Q9QXZ6 670 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Bcl10Q9Z0H7 233 aa19.45■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 A0A286YD17 136 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 IsxA1A546 240 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Cd300cA2A7V7 229 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Olfr574F8VQ18 346 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 TspearJ3S6Y1 670 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Nme6O88425 189 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Hcn1O88704 910 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Ccr4P51680 360 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Klf16P58334 251 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Tuba1cP68373 449 aaKnown RBP19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Cdh10P70408 788 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Sox14Q04892 240 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Nutm2Q3V0C3 733 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 BC080695Q66JY9 481 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Fpr-rs7Q71MR7 338 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Spag1Q80ZX8 901 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Gpr171Q8BG55 319 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Plppr5Q8BJ52 321 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Hbq1aQ8BYM1 145 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 BroxQ8K2Q7 411 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 SgtbQ8VD33 304 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Hyal3Q8VEI3 412 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Olfr531Q8VGL2 304 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 St3gal4Q91Y74 333 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Tktl1Q99MX0 595 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Gnpda2Q9CRC9 276 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Nudt17Q9CWD3 296 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Fam166aQ9D4K5 319 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Fam69aQ9D6I7 428 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Dda1Q9D9Z5 102 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Tuba8Q9JJZ2 449 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Lrit3W8DXL4 681 aa19.44■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Zfp433A0A0J9YUD4 600 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Gm32687A0A1W2P6H7 600 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Olfr74A2BHP6 318 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Fam71dD3YV92 440 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Fam46aD3Z5S8 447 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Mtnd4P03911 459 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Polr1cP52432 346 aaKnown RBP19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Tuba4aP68368 448 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Q32P12 615 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Wfdc6aQ3UW55 136 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Gm14851Q5ERJ0 116 aa19.43■□□□□ 0.7
Ccdc88a-202ENSMUST00000109477 Laptm5Q61168 261 aa19.43■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms