RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Mettl21eQ8CDZ2 244 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Ttc23Q8CHY7 488 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Unc5dQ8K1S2 956 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Dusp15Q8R4V2 235 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Lipt1Q8VCM4 373 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Rab7bQ8VEA8 199 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Erlec1Q8VEH8 483 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr1Q8VGI1 314 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr656Q8VGX9 329 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Tmed9Q99KF1 235 aaKnown RBP17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Gnpda2Q9CRC9 276 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 DiabloQ9JIQ3 237 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Dnaja4Q9JMC3 397 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Vmn1r10W4VSP8 311 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Ankrd12G5E893 2041 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Fer1l5P0DM40 2038 aa17■□□□□ 0.31
Trim47-202ENSMUST00000106441 Ighv6-6A0A075B5T3 119 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Ppp1r3dA2AJW4 279 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 9630041A04RikD3Z3U4 205 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Vmn2r98E9PZ56 857 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Arl9F7BE40 171 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Vmn2r117K7N6V1 857 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Best1O88870 551 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 P01654 111 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 P01656 111 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 P03977 111 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Hoxd9P28357 339 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Syt4P40749 425 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Snrpd2P62317 118 aaKnown RBP16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Dvl3Q61062 716 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Tmed3Q78IS1 221 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Rab43Q8CG50 210 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Tmem17Q8K0U3 198 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Cables2Q8K3M5 476 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Sdr9c7Q8K3P0 313 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Irf2bplQ8K3X4 775 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Ntng1Q8R4G0 539 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Zfp709Q8VC29 727 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Med9Q8VCS6 142 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr202Q8VGQ3 307 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr658Q8VGV5 323 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Ppil3Q9D6L8 161 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Wdr61Q9ERF3 305 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Pmm2Q9Z2M7 242 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr1555-ps1A0A140LHT7 321 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr1025-ps1A0A140T8K3 312 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Cela3aA2A9U8 283 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Zfp937A2ANU7 503 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Fpr-s1O08790 351 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Dscr3O35075 297 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 FxnO35943 207 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Csnk2a2O54833 350 aaKnown RBP16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Hsd3b2P26149 373 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Mc3rP33033 323 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Thbs1P35441 1170 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Yes1Q04736 541 aaKnown RBP16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 HgfQ08048 728 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 TfptQ3U1J1 259 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Lhfpl5Q4KL25 219 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Snx33Q4VAA7 574 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Znf182Q6P560 627 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Znf592Q8BHZ4 1262 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 H2afy2Q8CCK0 372 aaKnown RBP16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Adam4Q8CGQ2 763 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Tmem242Q8VCR3 140 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Plet1Q8VEN2 237 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr1226Q8VGM5 310 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Mrpl37Q921S7 423 aaKnown RBP16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Mrpl43Q99N89 183 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Lamtor1Q9CQ22 161 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 Gmeb1Q9JL60 562 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 TapbpQ9R233 465 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 NcdnQ9Z0E0 729 aa16.99■□□□□ 0.31
Trim47-202ENSMUST00000106441 4930433I11RikA0A0U1RPT6 723 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 PvrigA0A1B0GS01 234 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Gm595A2AF73 655 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Slc9a5B2RXE2 898 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Rnf13O54965 381 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Pcp2P12660 120 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Srp54P14576 504 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 AcadlP51174 430 aaKnown RBP16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Mtf1Q07243 675 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Riiad1Q3KNY5 119 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Cnrip1Q5M8N0 164 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Taar7bQ5QD11 358 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Slc30a1Q60738 503 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Spag1Q80ZX8 901 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 H2-M10.5Q85ZW7 330 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Mfsd11Q8BJ51 449 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 NdnfQ8C119 568 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr1232Q8VEX7 311 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Olfr692Q8VF03 329 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 SdhcQ9CZB0 169 aaKnown RBP16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Slamf9Q9D780 285 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Marveld3Q9D956 376 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Gm14399A2ARW8 610 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Gm20547B8JJN0 1276 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Prr36E9PV26 1098 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 Cldn34aG3UW52 211 aa16.98■□□□□ 0.31
Trim47-202ENSMUST00000106441 NgpO08692 167 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms