RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ecm29Q6PDI5 1840 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm11361A0A1Y7VKY1 152 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm10260F6YVP7 152 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Rps18P62270 152 aaKnown RBP13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 TrmoQ562D6 431 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Fmr1nbQ80ZA7 238 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr126Q8VGF0 319 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Sgk2Q9QZS5 367 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1410E9PYK6 323 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tpi1P17751 299 aaKnown RBP13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Hnf1bP27889 558 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Kcnj8P97794 424 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ankub1Q3UUE9 192 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nfatc2Q60591 927 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Rasl2-9Q61820 216 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nptx1Q62443 432 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Lcn4Q62472 185 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Paqr3Q6TCG8 311 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tagln2Q9WVA4 199 aaKnown RBP13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cx3cr1Q9Z0D9 354 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Med1Q925J9 1575 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Slc37a4A0A1L1SUI3 450 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Dlgap4B1AZP2 992 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm10608E9PZ13 166 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Galr1P56479 348 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ranbp9P69566 653 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 NnatQ61979 81 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 PtprcapQ64697 197 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1325Q8VF43 315 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1423Q8VFV0 310 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 PclafQ9CQX4 110 aaKnown RBP13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gpr45Q9EQQ4 373 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Kcnk7Q9Z2T1 307 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm4924A0A1B0GR71 966 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr839-ps1A0A1D5RMH6 312 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm12248A0A1W2P8B8 313 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn2r9K7N6Z8 848 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 GaltQ03249 379 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Grb2Q60631 217 aaKnown RBP13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Sox17Q61473 419 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Surf4Q64310 269 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Sdc3Q64519 442 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gpr75Q6X632 540 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1102Q8VES2 324 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ms4a4dQ99N05 225 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zfp994J3QM38 661 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 2410002F23RikQ3TE80 284 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1148Q7TR35 314 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mrps10Q80ZK0 160 aaKnown RBP13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm5591Q8CDK1 855 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 GrpQ8R1I2 146 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn1r172Q9EPS4 313 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mageh1Q9NWG9 218 aa13.18□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nkx6-2D3Z4R4 277 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 IfnabL7MTU6 190 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Hsd3b6O35469 373 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 NfkbieO54910 364 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 EhfO70273 300 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Kcnk12Q76M80 430 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1137Q7TR40 310 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cdk5rap1Q8BTW8 588 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Coro2aQ8C0P5 524 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 QprtQ91X91 299 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Raver1Q9CW46 748 aaKnown RBP13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tmem135Q9CYV5 458 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Syngr4Q9Z1L2 233 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Skint2A7XUX6 400 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Usp51B1AY15 661 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn2r82G3UWA2 865 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 HccsP53702 272 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Rps15aP62245 130 aaKnown RBP13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Pld6Q5SWZ9 221 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Sirt3Q8R104 334 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr156Q8VGA9 318 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr73Q920P2 313 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Rpl17Q9CPR4 184 aaKnown RBP13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 A430033K04RikE9Q8G5 680 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zmat3O54836 290 aaKnown RBP13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm9125P0DMR6 365 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Siah1aP61092 282 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tm4sf1Q64302 202 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nupl2Q8CIC2 420 aaKnown RBP13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 H2-Q4Q8HWB2 354 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Acy1Q99JW2 408 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Pbx4Q99NE9 378 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tbl1xQ9QXE7 527 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Znf318Q99PP2 2237 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr573-ps1A0A1B0GRU2 297 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Hoxb5P09079 269 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 4933402N03RikQ8CDT9 329 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ubl7Q91W67 380 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cotl1Q9CQI6 142 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 C1qtnf2Q9D8U4 294 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Syt8Q9R0N6 395 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr555E9Q547 315 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cxcl5P50228 132 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cass4Q08EC4 804 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm525Q3V3I5 90 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 QpctlQ8BH73 383 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Peli3Q8BXR6 445 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 84.3 ms