RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gm28729A0A1B0GSW2 409 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pramef6A2A8M8 474 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr1164A2AVT5 326 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Prdm13E9PZZ1 754 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 EmdO08579 259 aaKnown RBP10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 NelfeP19426 375 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Nr2f6P43136 390 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 AgrpP56473 131 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 CckbrP56481 453 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tmprss9P69525 1065 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 VaspP70460 375 aaKnown RBP10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Mtf1Q07243 675 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cldn34b4Q3V0X2 211 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 EndouQ3V188 412 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Traf4Q61382 470 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rbm38Q62176 237 aaKnown RBP10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 RfkQ8CFV9 155 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr166Q8VGX2 312 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Impa2Q91UZ5 290 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 SharpinQ91WA6 380 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Emc7Q9EP72 241 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 PrknQ9WVS6 464 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gm3952A0A0A6YXJ1 191 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 BC024063A0A1W2P7G7 749 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pgm2A2CEK3 580 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Vmn2r109K7N747 858 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cyp1a2P00186 513 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Hmgn1P18608 96 aaKnown RBP10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Dbx1P52950 335 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Arf3P61205 181 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cxcr4P70658 359 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Dgcr2P98154 548 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ugt2b36Q3UEP4 530 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Nlrc3Q5DU56 1064 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Foxd3Q61060 465 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tex261Q62302 196 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tgfbr2Q62312 592 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tgoln1Q62313 353 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cox15Q8BJ03 413 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Znf786Q8BV42 777 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 FkrpQ8CG64 494 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Vmn1r85Q8VIB8 308 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 OgfrQ99PG2 633 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Krt88Q9CPR6 171 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gnpda2Q9CRC9 276 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ak4Q9WUR9 223 aaKnown RBP10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Igkv12-98A0A0G2JGF9 115 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Vmn2r117K7N6V1 857 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Man2b2O54782 1018 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 MagP20917 626 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cd40lgP27548 260 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 PtgirP43252 415 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rps15aP62245 130 aaKnown RBP10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Apoc2Q05020 97 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Foxk2Q3UCQ1 651 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rbbp4Q60972 425 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Fblim1Q71FD7 375 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr1275Q7TQY8 312 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Slc30a6Q8BJM5 460 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Klhl31Q8BWA5 634 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Krtcap3Q8K177 240 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Galnt18Q8K1B9 622 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cables2Q8K3M5 476 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Irf2bp1Q8R3Y8 584 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr161Q8VGB9 313 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Asb15Q8VHS6 583 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Vmn1r51Q8VIC6 319 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Psg23Q9D2U0 471 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Psg21Q9DAV5 471 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Clec3aQ9EPW4 196 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Plek2Q9WV52 353 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Zfp978A2A7I1 335 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Skint4A7TZF3 474 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Catsperg1E9Q355 1151 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 P01648 108 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Myf5P24699 255 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gstm5P48774 224 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Stard6P59096 233 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tcf7Q00417 419 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 FcamrQ2TB54 535 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Arntl2Q2VPD4 579 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ctu2Q3U308 514 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Itgb2lQ3UV74 738 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Slc17a4Q5NCM1 492 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Znf354aQ61751 572 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 DraxinQ6PAL1 343 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tas2r110Q7M712 333 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr1133Q7TR44 313 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Dsg1cQ7TSF0 911 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Adamtsl2Q7TSK7 957 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Glrx5Q80Y14 152 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rspo2Q8BFU0 243 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 9130023H24RikQ8BG98 337 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Arfrp1Q8BXL7 201 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Fgd2Q8BY35 655 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 4933402N03RikQ8CDT9 329 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr952Q8VFD7 314 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr651Q8VG78 313 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr1048Q8VGS2 320 aa10.15□□□□□ -0.78
Msh3-201ENSMUST00000022220 Raf1Q99N57 648 aa10.15□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms