RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gpr68Q8BFQ3 365 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Sertm1Q8CD78 107 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Rfwd3Q8CIK8 774 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Plekho2Q8K124 495 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 LctlQ8K1F9 566 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 HpgdQ8VCC1 269 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Rab40bQ8VHP8 278 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 GmfgQ9ERL7 142 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Dnajb2Q9QYI5 324 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Xpr1Q9Z0U0 695 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Dchs1E9PVD3 3291 aa15.1■□□□□ 0.01
Trim28-201ENSMUST00000005705 Gm28729A0A1B0GSW2 409 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cd209fD3Z1H5 274 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Znf296E9Q6W4 445 aaKnown RBP15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Ceacam1P31809 521 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 GhrhrP32082 423 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Tcfl5Q32NY8 489 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Rcbtb1Q6NXM2 531 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Mfsd4aQ6PDC8 510 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Slc6a7Q6PGE7 637 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Pgr15lQ80T54 456 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Mettl20Q80ZM3 255 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 PiguQ8K358 434 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr1226Q8VGM5 310 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Ceacam2Q925P2 520 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Prdm5Q9CXE0 599 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cdrt4Q9DA64 179 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cbll1Q9JIY2 491 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Dock11A2AF47 2073 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Fer1l5P0DM40 2038 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 PtprsB0V2N1 1907 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 I0C0044D17RikA6PWL3 169 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cd14P10810 366 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 TpbpaP13438 124 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Hnrnpa1P49312 320 aaKnown RBP15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Thbs2Q03350 1172 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 2410002F23RikQ3TE80 284 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Slc35g3Q5F297 340 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Laptm5Q61168 261 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Gm5346Q7M766 736 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr298Q7TS06 332 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Avl9Q80U56 649 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 RfkQ8CFV9 155 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr1426Q8VG74 311 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Rpe65Q91ZQ5 533 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Tnk1Q99ML2 666 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 NaxdQ9CZ42 343 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Naalad2Q9CZR2 740 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cst11Q9D269 139 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Izumo2Q9DA16 220 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Alg5Q9DB25 324 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 S100a2J3QMC7 104 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Hoxd9P28357 339 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Tamm41Q3TUH1 337 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cxcl17Q5UW37 119 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Rps27Q6ZWU9 84 aaKnown RBP15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Hist1h2aaQ8CGP4 129 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Tmem17Q8K0U3 198 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Klhdc8aQ91XA8 350 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Pcdhb16Q91Y03 802 aa15.09■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr634-ps1A0A1B0GRN7 318 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 St8sia2O35696 375 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 ComtO88587 265 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr6P34986 316 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cdk5P49615 292 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Fgf13P70377 245 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cdh10P70408 788 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 St3gal3P97325 374 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Bpifa1P97361 278 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Gtpbp2Q3UJK4 602 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 CfiQ61129 603 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Morn4Q6PGF2 146 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Sgpp2Q810K3 354 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Cldn17Q8BXA6 224 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Fam149aQ8CFV2 787 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr689Q8VG18 320 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr808Q8VGI8 312 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr658Q8VGV5 323 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 CenpvQ9CXS4 252 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Ulk2Q9QY01 1037 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Adam26aQ9R158 697 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 PtgfrnQ9WV91 879 aa15.08■□□□□ 0.01
Trim28-201ENSMUST00000005705 Igkv16-104A0A0B4J1I1 116 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Vmn2r108E9PYS0 855 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Rspo3Q2TJ95 277 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Kdm4dQ3U2K5 510 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Polr2mQ6P6I6 366 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Mettl6Q8BVH9 282 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Chmp1b2Q9CQD4 199 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Fam122cQ9D5J5 180 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 SrpraQ9DBG7 636 aaKnown RBP15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Dctn6Q9WUB4 190 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Apc2Q9Z1K7 2274 aa15.08■□□□□ 0
Trim28-201ENSMUST00000005705 Esp22A8R0V4 111 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Gm10112D3YWP5 117 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Gm1330D3Z460 184 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Gm8220F6YKI2 213 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Zfp989H3BLB0 661 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Elavl3Q60900 367 aaKnown RBP15.07■□□□□ 0
Trim28-201ENSMUST00000005705 MkxQ8BIA3 353 aa15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms