RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 LexmA2AVQ5 414 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Pgm2A2CEK3 580 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Tmem44E9Q4M0 433 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Tmem200cJ3QK46 637 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 RaxO35602 342 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Wnt11P48615 354 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Tamm41Q3TUH1 337 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Serpina3fQ80X76 445 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Rgp1Q8BHT7 391 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Ablim2Q8BL65 612 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr686Q8VGX3 317 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Fmo4Q8VHG0 560 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 1700029P11RikQ9CQ68 150 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Aldh9a1Q9JLJ2 494 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Ulk2Q9QY01 1037 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 H2afb1S4R1E0 115 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Rpl7a-ps5A0A140T8L3 268 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc9a6A1L3P4 702 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm13178B1AVU7 408 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp54E9PW05 585 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 C4bpaP08607 469 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Srp54P14576 504 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 RykQ01887 594 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Wdr20Q3UWE6 569 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Eid2Q6X7S9 236 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Slitrk4Q810B8 837 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 GskipQ8BGR8 139 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Cmpk1Q9DBP5 196 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc7a7Q9Z1K8 510 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Ccl27Q9Z1X0 120 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 CorinQ9Z319 1113 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Dcst2A0A140LIJ0 701 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 SvaE9PX96 165 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Bcl2a1dO55179 172 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Mmp12P34960 473 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Cd38P56528 304 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Ppp2cbP62715 309 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Ppp2caP63330 309 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Fabp5Q05816 135 aaKnown RBP15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Taar7bQ5QD11 358 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Il10rbQ61190 349 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Cd53Q61451 219 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Pi15Q8BS03 258 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Fbxl8Q8CIG9 374 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 GhitmQ91VC9 346 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Fam118aQ91YN1 357 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 BniplQ99JU7 328 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Fank1Q9DAM9 344 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Hoga1Q9DCU9 321 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 Wdr61Q9ERF3 305 aa15.25■□□□□ 0.03
Shh-201ENSMUST00000002708 1700025B11RikA0A087WNZ6 93 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm14085A2AWR5 660 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Vmn2r105E9Q3A5 860 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm1110F6Y113 635 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp619G3X9T2 1161 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Mup3P04939 184 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Nckap1P28660 1128 aaKnown RBP15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 C130050O18RikQ497Y9 356 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Ranbp3lQ6PDH4 491 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 B430306N03RikQ6QX36 289 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Sult2a8Q8BGL3 282 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Casc3Q8K3W3 698 aaKnown RBP15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Egln3Q91UZ4 239 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Gnpda2Q9CRC9 276 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Eif3fQ9DCH4 361 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Isg20Q9JL16 300 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Fbxw5Q9QXW2 573 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Asic5Q9R0Y1 495 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Stub1Q9WUD1 304 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Pmm2Q9Z2M7 242 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Vmn1r177E9PXM3 309 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr294F7CWV4 335 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Cldn34aG3UW52 211 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp141G3UY09 685 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Vmn1r14H3BJ46 303 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc12a3P59158 1002 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Rps7P62082 194 aaKnown RBP15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Fads2p1Q0VAX3 487 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 1700066B19RikQ3TS39 127 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Uap1l1Q3TW96 507 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Nudt18Q3U2V3 323 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Gtpbp2Q3UJK4 602 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc35c1Q8BLX4 363 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Lix1lQ8BQ89 337 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 H2afy2Q8CCK0 372 aaKnown RBP15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Grhl2Q8K5C0 625 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Q8R2K8 148 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Tnk1Q99ML2 666 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Gmeb1Q9JL60 562 aa15.24■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr1555-ps1A0A140LHT7 321 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 A0A1Y7VIU7 259 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp442A2AQA0 667 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Enthd1E9Q1Z2 618 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp605E9QAH2 694 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm8374L7N2A9 172 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Acp5Q05117 327 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Ccdc190Q3URK1 288 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Diras2Q5PR73 199 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Q5SPV6 233 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 MertkQ60805 994 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms