RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	ROPN1	Q9HAT0	212 aa	Predicted RBP	13	□□□□□ -0.33
TARDBP-231	ENST00000639599	CHRNA9	Q9UGM1	479 aa		13	□□□□□ -0.33
TARDBP-231	ENST00000639599	HRNR	Q86YZ3	2850 aa	Predicted RBP	13	□□□□□ -0.33
TARDBP-231	ENST00000639599	DPRX	A6NFQ7	191 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	OR5H1	A6NKK0	313 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	OVOL3	O00110	214 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	TLX2	O43763	284 aa	Predicted RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	SSX4	O60224	188 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ADAM11	O75078	769 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	MRPL33	O75394	65 aa	Known RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	UGT2B17	O75795	530 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	IGHV3-9	P01782	118 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	BPGM	P07738	259 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	NUDT17	P0C025	328 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	DHRS4L1	P0CG22	281 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	OR12D1	P0DN82	309 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	BMP4	P12644	408 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	IGHV1-2	P23083	117 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	CASP9	P55211	416 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	C21orf58	P58505	322 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	CHRNE	Q04844	493 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	GNA13	Q14344	377 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	SMU1	Q2TAY7	513 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	FBXW9	Q5XUX1	488 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	CLEC2A	Q6UVW9	174 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	CXXC5	Q7LFL8	322 aa	Known RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ATG4D	Q86TL0	474 aa	Predicted RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	MTDH	Q86UE4	582 aa	Known RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	KIRREL3	Q8IZU9	778 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	CLEC4F	Q8N1N0	589 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ARFGAP2	Q8N6H7	521 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	OR52N5	Q8NH56	324 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	LILRB1	Q8NHL6	650 aa	Predicted RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	OIT3	Q8WWZ8	545 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ZIM3	Q96PE6	472 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	MDFI	Q99750	246 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ZNF350	Q9GZX5	532 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	POLE3	Q9NRF9	147 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ACER3	Q9NUN7	267 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	ASB6	Q9NWX5	421 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	UPB1	Q9UBR1	384 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	LGALS13	Q9UHV8	139 aa		12.99	□□□□□ -0.33
TARDBP-231	ENST00000639599	HIVEP2	P31629	2446 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599		M0R1B8	84 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	ETV2	O00321	342 aa	Predicted RBP	12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	KIAA0513	O60268	411 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	FCMR	O60667	390 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	IGHV4-39	P01824	125 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	MYZAP	P0CAP1	466 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	CCNA2	P20248	432 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	UQCRC2	P22695	453 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	ZNF83	P51522	516 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	CLNS1A	P54105	237 aa	Known RBP	12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	OR2B6	P58173	313 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	PDK3	Q15120	406 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	PGGHG	Q32M88	737 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	HMBOX1	Q6NT76	420 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	KLHL24	Q6TFL4	600 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	CASP12	Q6UXS9	341 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	GRINA	Q7Z429	371 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	ANKRD46	Q86W74	232 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	RIMKLA	Q8IXN7	391 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	TRIML2	Q8N7C3	387 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	DDIT4L	Q96D03	193 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	NAA11	Q9BSU3	229 aa	Predicted RBP	12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	CACYBP	Q9HB71	228 aa	Known RBP	12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	CTPS2	Q9NRF8	586 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	ASIC5	Q9NY37	505 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	TAS2R16	Q9NYV7	291 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	MARCO	Q9UEW3	520 aa	Predicted RBP	12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	HDGFL3	Q9Y3E1	203 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	ARID1A	O14497	2285 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	DSCAM	O60469	2012 aa		12.98	□□□□□ -0.33
TARDBP-231	ENST00000639599	PRSS51	A0A1B0GVH4	220 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	WDR91	A4D1P6	747 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	DNPH1	O43598	174 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	CD5L	O43866	347 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	RAMP1	O60894	148 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	PMS2P2	O95744	297 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	SERPINE1	P05121	402 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	COX5A	P20674	150 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	PTAFR	P25105	342 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	HTR3A	P46098	478 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	FABP6	P51161	128 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	DSCR9	P59020	149 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	RAB35	Q15286	201 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	CHI3L2	Q15782	390 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	DPY19L1	Q2PZI1	675 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	ABLIM2	Q6H8Q1	611 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	OR7E24	Q6IFN5	339 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	PODNL1	Q6PEZ8	512 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	SPATA3	Q8NHX4	192 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	RAB8B	Q92930	207 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	ROPN1L	Q96C74	230 aa		12.97	□□□□□ -0.33
TARDBP-231	ENST00000639599	DNAJA3	Q96EY1	480 aa		12.97	□□□□□ -0.33

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