RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 OR12D1P0DN82 309 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 TFPIP10646 304 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 GGT1P19440 569 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 CSNK2A1P68400 391 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 DMTNQ08495 405 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 IFFO1Q0D2I5 559 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 MAPK14Q16539 360 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 TIMM23BQ5SRD1 257 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 EIF3MQ7L2H7 374 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 CXXC5Q7LFL8 322 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 C16orf62Q7Z3J2 963 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 MTDHQ86UE4 582 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 P2RY8Q86VZ1 359 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 ZNF433Q8N7K0 673 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 XAGE5Q8WWM1 108 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 DNAJA3Q96EY1 480 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 PPP1R36Q96LQ0 422 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 ROPN1BQ9BZX4 212 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 GRIP2Q9C0E4 1043 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 ZNF350Q9GZX5 532 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 ROPN1Q9HAT0 212 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 EXD2Q9NVH0 621 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 NPAP1Q9NZP6 1156 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 PCDHGB4Q9UN71 923 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 FBN1P35555 2871 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 CR1P17927 2039 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 ATRQ13535 2644 aa11.82□□□□□ -0.52
POLR2J3-219ENST00000608621 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 RNASET2O00584 256 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 ABCD4O14678 606 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 ITM2AO43736 263 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 IGHV3-9P01782 118 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 COX5AP20674 150 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 RYKP34925 604 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 PGM1P36871 562 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 APOBEC1P41238 236 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 PDK3Q15120 406 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 SMU1Q2TAY7 513 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 SYT14P1Q58G82 188 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 DNM1P46Q6ZS02 220 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 DTX2Q86UW9 622 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 UBE2J2Q8N2K1 259 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 OR4A15Q8NGL6 344 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 SPATA3Q8NHX4 192 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 ZNF563Q8TA94 476 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 MIPOL1Q8TD10 442 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 RAB8BQ92930 207 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 ZG16BQ96DA0 208 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 ARL5BQ96KC2 179 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 HS6ST2Q96MM7 605 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 AKTIPQ9H8T0 292 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 CTPS2Q9NRF8 586 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 FAIMQ9NVQ4 179 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 ASIC5Q9NY37 505 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 NOP53Q9NZM5 478 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 B3GALT5Q9Y2C3 310 aa11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 NOSIPQ9Y314 301 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-219ENST00000608621 IGKV3D-15A0A087WSY6 115 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 PRSS51A0A1B0GVH4 220 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 CIB4A0PJX0 185 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 OR5H1A6NKK0 313 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 CCT8L1PA6NM43 557 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 ZNF716A6NP11 495 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 TYROBPO43914 113 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 SSX4O60224 188 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 SCN2BO60939 215 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 BCAS1O75363 584 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 RAD51DO75771 328 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 UQCRC2P22695 453 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 NTF4P34130 210 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 ETV4P43268 484 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 CDH11P55287 796 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 PHC1P78364 1004 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 PDCD2Q16342 344 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 ATAD3BQ5T9A4 648 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 AGAP6Q5VW22 663 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 TYW3Q6IPR3 259 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 TNFAIP8L2Q6P589 184 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 SSX8Q7RTT4 187 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 HMGN2P46Q86SG4 172 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 ANKRD46Q86W74 232 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 OR8J2Q8NGG1 315 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 OR52N5Q8NH56 324 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 SLC25A43Q8WUT9 341 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 CCDC106Q9BWC9 280 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 DPY30Q9C005 99 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 SAP130Q9H0E3 1048 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 BARX1Q9HBU1 254 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 EMC3Q9P0I2 261 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 SLC35A3Q9Y2D2 325 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 WDR45Q9Y484 360 aa11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 SPIN1Q9Y657 262 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-219ENST00000608621 GOLGA8QA0A0J9YX86 632 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 A0A1W2PR80 420 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 WDR91A4D1P6 747 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 GOLGA8OA6NCC3 632 aa11.79□□□□□ -0.52
POLR2J3-219ENST00000608621 E7EQL1 145 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms