RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 BMP7P18075 431 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FKBP2P26885 142 aaKnown RBP11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DLSTP36957 453 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GPR4P46093 362 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PCYT1AP49585 367 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SSR4P51571 173 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 POLR2HP52434 150 aaKnown RBP11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FBXW4P57775 412 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TUBA3CQ13748 450 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GINS1Q14691 196 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SLC25A53Q5H9E4 307 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CBLN3Q6UW01 205 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PTCHD4Q6ZW05 846 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PRSS48Q7RTY5 328 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MARCH3Q86UD3 253 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DTX1Q86Y01 620 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CYP4Z2PQ8N1L4 340 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 LNX2Q8N448 690 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SVOPQ8N4V2 548 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ZNF563Q8TA94 476 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FANK1Q8TC84 345 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GPR119Q8TDV5 335 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ADAMTS17Q8TE56 1095 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FCGR1BQ92637 280 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FGF11Q92914 225 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MYDGFQ969H8 173 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SGTBQ96EQ0 304 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DTNBP1Q96EV8 351 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SGCZQ96LD1 299 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NODALQ96S42 347 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MESP1Q9BRJ9 268 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SH2D2AQ9NP31 389 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TBC1D23Q9NUY8 699 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FAM86C1Q9NVL1 165 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PSORS1C1Q9UIG5 152 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SIGLEC7Q9Y286 467 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 WIF1Q9Y5W5 379 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SNX5Q9Y5X3 404 aa11.21□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PMS2P1A4D2B8 440 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ENO4A6NNW6 628 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CDC42EP2O14613 210 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SLC30A4O14863 429 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OIP5O43482 229 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PIP5K1CO60331 668 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF354AO60765 605 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FAM20BO75063 409 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FZD7O75084 574 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PTP4A3O75365 173 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MT-ATP6P00846 226 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ATP6V1B1P15313 513 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MAKP20794 623 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 EEF1B2P24534 225 aaKnown RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MST1P26927 711 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 POU1F1P28069 291 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RBMS1P29558 406 aaKnown RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SLC15A1P46059 708 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 GTF2A1P52655 376 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PRPS1P60891 318 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RPS4XP62701 263 aaKnown RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 GABREP78334 506 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PGGHGQ32M88 737 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 NDUFAF6Q330K2 333 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZBED5Q49AG3 693 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RNLSQ5VYX0 342 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RTL4Q6ZR62 310 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TMPRSS7Q7RTY8 843 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RPS19BP1Q86WX3 136 aaKnown RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CCDC103Q8IW40 242 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 GATSQ8NAP1 163 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PFN4Q8NHR9 129 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 C9orf43Q8TAL5 461 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TMEM163Q8TC26 289 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 STK35Q8TDR2 534 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PAQR8Q8TEZ7 354 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ASB15Q8WXK1 588 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 DPH1Q9BZG8 443 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RTN4RQ9BZR6 473 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OR52D1Q9H346 318 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF160Q9HCG1 818 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RASSF1Q9NS23 344 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 C20orf141Q9NUB4 165 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MRPS18AQ9NVS2 196 aaKnown RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 P4HTMQ9NXG6 502 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TAS2R10Q9NYW0 307 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FBXL4Q9UKA2 621 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF337Q9Y3M9 751 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RPL36Q9Y3U8 105 aaKnown RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CHCHD2Q9Y6H1 151 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PCSK5Q92824 1860 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 A0A0C4DFX4 3053 aa11.2□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 KIAA1549Q9HCM3 1950 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 IGKV1D-42A0A075B6H8 117 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 A0A087WZY1 265 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SPAARA0A1B0GVQ0 90 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF701M0R085 212 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 BHLHE40O14503 412 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms