RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PLXDC1Q8IUK5 500 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 LACC1Q8IV20 430 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 LMO3Q8TAP4 145 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 VSX1Q9NZR4 365 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 CHD3Q12873 2000 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 GLTPD2A6NH11 291 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TNFRSF10AO00220 468 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 FRS3O43559 492 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 DUSP3P51452 185 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 CXADRP78310 365 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 LTBQ06643 244 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 HCAR1Q9BXC0 346 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ARHGAP39Q9C0H5 1083 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 OLAHQ9NV23 265 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 PUS1Q9Y606 427 aaKnown RBP eCLIP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 IMPA2O14732 288 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 PPP3CBP16298 524 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 DCP2Q8IU60 420 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ACPTQ9BZG2 426 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 QRSL1Q9H0R6 528 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 OR51B6Q9H340 312 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 APOBEC3BQ9UH17 382 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 RARRES3Q9UL19 164 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 AGAP14A8MT82 685 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 CEBPZOSA8MTT3 80 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 CA12O43570 354 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 DPM1O60762 260 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 FBXO24O75426 580 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 C21orf33P30042 268 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 EIF2DP41214 584 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 EXOSC6Q5RKV6 272 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 IL22RA1Q8N6P7 574 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 OR6F1Q8NGZ6 308 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 BORCS6Q96GS4 357 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TXLNGYQ9BZA5 131 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 MCOLN1Q9GZU1 580 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ACKR4Q9NPB9 350 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 SLC35A3Q9Y2D2 325 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TRAV27A0A087WT01 109 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 LOC102725191A0A1B0GVB3 256 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 STC2O76061 302 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 LPLP06858 475 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF28P17035 718 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 NFYAP23511 347 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TSFMP43897 325 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TGM4P49221 684 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 SIM1P81133 766 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 SERTAD2Q14140 314 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 BEX5Q5H9J7 111 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF778Q96MU6 729 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 KCNK13Q9HB14 408 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 RAB19A4D1S5 217 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 IER5LQ5T953 404 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ZBED3Q96IU2 234 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TAS2R16Q9NYV7 291 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 RBPJLQ9UBG7 517 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TCRBV3S1A0A5B6 114 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF33BQ06732 778 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TBCEQ15813 527 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 PAGE3Q5JUK9 113 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 SMIM15Q7Z3B0 74 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 TMEM239Q8WW34 195 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 RTP4Q96DX8 246 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 IGSF21Q96ID5 467 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 FANCMQ8IYD8 2048 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 IL32P24001 234 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 PPT1P50897 306 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 HBG1P69891 147 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 HBG2P69892 147 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 SLC9A3R2Q15599 337 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 SLC6A19Q695T7 634 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 DNAJC5GQ8N7S2 189 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 OR6T1Q8NGN1 323 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 SFXN2Q96NB2 322 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 GSTO2Q9H4Y5 243 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 CUTCQ9NTM9 273 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 FUT1P19526 365 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 SERPINA2P20848 420 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 MFGE8Q08431 387 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-217ENST00000602723 VEZF1Q14119 521 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 FAM199XQ6PEV8 388 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-217ENST00000602723 SIMC1Q8NDZ2 872 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 TANKQ92844 425 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 UPRTQ96BW1 309 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 DDX31Q9H8H2 851 aaKnown RBP9.01□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF281Q9Y2X9 895 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 ANKRD30BLA7E2S9 258 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 K7ERQ8 282 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 ITGB2P05107 769 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 PROS1P07225 676 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 HOXB5P09067 269 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 RAB40ALP0C0E4 278 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 RPS5P46782 204 aaKnown RBP9.01□□□□□ -0.97
CSMD1-217ENST00000602723 TPRA1Q86W33 373 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 TMEM163Q8TC26 289 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 CD200R1Q8TD46 325 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 RAB40AQ8WXH6 277 aa9.01□□□□□ -0.97
CSMD1-217ENST00000602723 SLC12A9Q9BXP2 914 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms