RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 IGHV1-2P23083 117 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 IDUAP35475 653 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 CSNK2A1P68400 391 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-207ENST00000593089 CHI3L2Q15782 390 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 PGGHGQ32M88 737 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 TYW3Q6IPR3 259 aaKnown RBP18.1■□□□□ 0.49
TRIM47-207ENST00000593089 HEPHL1Q6MZM0 1159 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 HMGN2P46Q86SG4 172 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 OR8J2Q8NGG1 315 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 ZNF563Q8TA94 476 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 AENQ8WTP8 325 aaKnown RBP18.1■□□□□ 0.49
TRIM47-207ENST00000593089 MUCL1Q96DR8 90 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 ZIM3Q96PE6 472 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 MDFIQ99750 246 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 TRIM2Q9C040 744 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 WDR45Q9Y484 360 aa18.1■□□□□ 0.49
TRIM47-207ENST00000593089 BCAS1O75363 584 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-207ENST00000593089 AGR2O95994 175 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 IGHV3-9P01782 118 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 GGT1P19440 569 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 UQCRC2P22695 453 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 RYKP34925 604 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 PGM1P36871 562 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ACVR1BP36896 505 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ABCE1P61221 599 aaKnown RBP18.09■□□□□ 0.49
TRIM47-207ENST00000593089 KRTAP1-1Q07627 177 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ETFDHQ16134 617 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ATAD3BQ5T9A4 648 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ABLIM2Q6H8Q1 611 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 MIPOL1Q8TD10 442 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 SLC25A43Q8WUT9 341 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ROPN1LQ96C74 230 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ALG2Q9H553 416 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 CTPS2Q9NRF8 586 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 CISD1Q9NZ45 108 aaKnown RBP18.09■□□□□ 0.49
TRIM47-207ENST00000593089 NPAP1Q9NZP6 1156 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 ADAM21Q9UKJ8 722 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 SLC35A3Q9Y2D2 325 aa18.09■□□□□ 0.49
TRIM47-207ENST00000593089 SPIN1Q9Y657 262 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-207ENST00000593089 CADP27708 2225 aa18.08■□□□□ 0.49
TRIM47-207ENST00000593089 PRSS51A0A1B0GVH4 220 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 SCN2BO60939 215 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 NDUFS7O75251 213 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 SERPINE1P05121 402 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 MYZAPP0CAP1 466 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 COX5AP20674 150 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 APOBEC1P41238 236 aaKnown RBP18.08■□□□□ 0.48
TRIM47-207ENST00000593089 PHC1P78364 1004 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 FUT5Q11128 374 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 TIMM23BQ5SRD1 257 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 ANXA8L1Q5VT79 327 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 EMBQ6PCB8 327 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 MTDHQ86UE4 582 aaKnown RBP18.08■□□□□ 0.48
TRIM47-207ENST00000593089 UBE2J2Q8N2K1 259 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 FAM71CQ8NEG0 241 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 CCDC106Q9BWC9 280 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 REG4Q9BYZ8 158 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 C20orf27Q9GZN8 174 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 SLCO5A1Q9H2Y9 848 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 EMC3Q9P0I2 261 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 RAP2CQ9Y3L5 183 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 CR1P17927 2039 aa18.08■□□□□ 0.48
TRIM47-207ENST00000593089 ANK3Q12955 4377 aaKnown RBP18.07■□□□□ 0.48
TRIM47-207ENST00000593089 SHISA9B4DS77 424 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 ABCD4O14678 606 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 RAD51DO75771 328 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 IGHV4-39P01824 125 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 PTNP21246 168 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 CHI3L1P36222 383 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-207ENST00000593089 CDH11P55287 796 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 DMTNQ08495 405 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 GPAT3Q53EU6 434 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 SAXO2Q658L1 398 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 DNAJC14Q6Y2X3 702 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-207ENST00000593089 FRRS1Q6ZNA5 592 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 ZNF433Q8N7K0 673 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-207ENST00000593089 VPS37AQ8NEZ2 397 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 ZG16BQ96DA0 208 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 ZHX1-C8orf76Q96EF9 292 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 ARL5BQ96KC2 179 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 TRAF4Q9BUZ4 470 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-207ENST00000593089 POLE3Q9NRF9 147 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 CHRNA9Q9UGM1 479 aa18.07■□□□□ 0.48
TRIM47-207ENST00000593089 GDF2Q9UK05 429 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-207ENST00000593089 NOSIPQ9Y314 301 aaKnown RBP18.07■□□□□ 0.48
TRIM47-207ENST00000593089 IGKV3D-15A0A087WSY6 115 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 OR5H1A6NKK0 313 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 CLDN24A6NM45 220 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 ZNF716A6NP11 495 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 ANKRD28O15084 1053 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 PGM3O95394 542 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 CD8AP01732 235 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 C1QCP02747 245 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 CCNA2P20248 432 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 KHKP50053 298 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 RPL14P50914 215 aaKnown RBP18.06■□□□□ 0.48
TRIM47-207ENST00000593089 PDK3Q15120 406 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 KRT71Q3SY84 523 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 SPANXN4Q5MJ08 99 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 FBXW9Q5XUX1 488 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms