RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 NID1P14543 1247 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 CREB1P16220 341 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 GGT1P19440 569 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 PDK3Q15120 406 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 PPA1Q15181 289 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 TIMM23BQ5SRD1 257 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 HEPHL1Q6MZM0 1159 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 TNFAIP8L2Q6P589 184 aaPredicted RBP12.17□□□□□ -0.46
GGA3-208ENST00000579743 GRINAQ7Z429 371 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 ANKRD46Q86W74 232 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 CMIPQ8IY22 773 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 DEPDC4Q8N2C3 294 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 PIGXQ8TBF5 258 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 PIWIL2Q8TC59 973 aaKnown RBP12.17□□□□□ -0.46
GGA3-208ENST00000579743 SMAP2Q8WU79 429 aaPredicted RBP12.17□□□□□ -0.46
GGA3-208ENST00000579743 PMM1Q92871 262 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 ROPN1LQ96C74 230 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 NEURL3Q96EH8 262 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 PAIP2Q9BPZ3 127 aaKnown RBP12.17□□□□□ -0.46
GGA3-208ENST00000579743 KLHDC3Q9BQ90 382 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 SLC35A5Q9BS91 424 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 QRSL1Q9H0R6 528 aaKnown RBP12.17□□□□□ -0.46
GGA3-208ENST00000579743 CACYBPQ9HB71 228 aaKnown RBP12.17□□□□□ -0.46
GGA3-208ENST00000579743 CHRNA9Q9UGM1 479 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 NOSIPQ9Y314 301 aaKnown RBP12.17□□□□□ -0.46
GGA3-208ENST00000579743 HDGFL3Q9Y3E1 203 aa12.17□□□□□ -0.46
GGA3-208ENST00000579743 MAP1AP78559 2803 aaPredicted RBP12.16□□□□□ -0.46
GGA3-208ENST00000579743 ZFHX3Q15911 3703 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 ABCA2Q9BZC7 2435 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 CIB4A0PJX0 185 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 CCT8L1PA6NM43 557 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 TRPC5OSA6NMA1 111 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 RYKP34925 604 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 MAGEA8P43361 318 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 MAP2K6P52564 334 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 KCNJ10P78508 379 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 ZNF844Q08AG5 666 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 TSC22D1Q15714 1073 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 ZNF672Q499Z4 452 aaPredicted RBP12.16□□□□□ -0.46
GGA3-208ENST00000579743 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 KLHL17Q6TDP4 642 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 SPATA19Q7Z5L4 167 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 CLEC4FQ8N1N0 589 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 RAB8BQ92930 207 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 APH1AQ96BI3 265 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 DDIT4LQ96D03 193 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 PANX1Q96RD7 426 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 NAA11Q9BSU3 229 aaPredicted RBP12.16□□□□□ -0.46
GGA3-208ENST00000579743 NUF2Q9BZD4 464 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 BARX1Q9HBU1 254 aaPredicted RBP12.16□□□□□ -0.46
GGA3-208ENST00000579743 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
GGA3-208ENST00000579743 PARPBPQ9NWS1 579 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 BTNL2Q9UIR0 455 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 PRDM4Q9UKN5 801 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 MGAT4BQ9UQ53 548 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 NF1P21359 2839 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 HEATR5AQ86XA9 2040 aa12.16□□□□□ -0.46
GGA3-208ENST00000579743 TMEM247A6NEH6 219 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 C9JVG2 144 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 SMAD9O15198 467 aaKnown RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 EIF1BO60739 113 aaKnown RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 MRPL33O75394 65 aaKnown RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 LYZL6O75951 148 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 H6PDO95479 791 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 KRT75O95678 551 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 PMS2P2O95744 297 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 TP53P04637 393 aaPredicted RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 PGM1P36871 562 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 CASP9P55211 416 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 VEZF1Q14119 521 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 CASP8Q14790 479 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 FAM174BQ3ZCQ3 159 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 CEP85LQ5SZL2 805 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 TYW3Q6IPR3 259 aaKnown RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 DNAJC14Q6Y2X3 702 aaPredicted RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 RAB3IL1Q8TBN0 382 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 HS6ST2Q96MM7 605 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 CCDC115Q96NT0 180 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 TRNT1Q96Q11 434 aaKnown RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 SAP130Q9H0E3 1048 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 SERHL2Q9H4I8 314 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 MTHFD2LQ9H903 347 aaPredicted RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 MEAF6Q9HAF1 191 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 CTPS2Q9NRF8 586 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 ASB6Q9NWX5 421 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
GGA3-208ENST00000579743 TRAPPC4Q9Y296 219 aa12.15□□□□□ -0.46
GGA3-208ENST00000579743 RAI1Q7Z5J4 1906 aaPredicted RBP12.14□□□□□ -0.47
GGA3-208ENST00000579743 IGKV3D-15A0A087WSY6 115 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms