RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ETFAP13804 333 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 PGCP20142 388 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 HOXC12P31275 282 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 NTF4P34130 210 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 IDH2P48735 452 aaKnown RBP10.56□□□□□ -0.72
LITAF-219ENST00000576334 PCYT1AP49585 367 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 DIO1P49895 249 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 SLC18A1P54219 525 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 CBX1P83916 185 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 PDCD4Q53EL6 469 aaKnown RBP10.56□□□□□ -0.72
LITAF-219ENST00000576334 TTMPQ5BVD1 217 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 RPS26P11Q5JNZ5 115 aaPredicted RBP10.56□□□□□ -0.72
LITAF-219ENST00000576334 TMEM201Q5SNT2 666 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 ATG16L1Q676U5 607 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 C3orf33Q6P1S2 294 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 ADGRG3Q86Y34 549 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 ZNF563Q8TA94 476 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 S100PBPQ96BU1 408 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 ZBTB18Q99592 522 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 EBF4Q9BQW3 602 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 TIGARQ9NQ88 270 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 DLL4Q9NR61 685 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 GLRX2Q9NS18 164 aa10.56□□□□□ -0.72
LITAF-219ENST00000576334 SULT2B1O00204 365 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 RFXANKO14593 260 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 ERLIN1O75477 346 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 GOSR1O95249 250 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 AGR2O95994 175 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 IGHV3-9P01782 118 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 YES1P07947 543 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 NUDT7P0C024 238 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 GKN3PP0CG01 181 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 TFPIP10646 304 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 RAC3P60763 192 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 PPP2R2AP63151 447 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 RASGEF1BQ0VAM2 473 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 RNPS1Q15287 305 aaKnown RBP10.55□□□□□ -0.72
LITAF-219ENST00000576334 ACKR1Q16570 336 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 SYT14P1Q58G82 188 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 AP1ARQ63HQ0 302 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 GTF2IRD2BQ6EKJ0 949 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 SLC2A7Q6PXP3 512 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 BEND4Q6ZU67 534 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 Q71RC1 249 aaPredicted RBP10.55□□□□□ -0.72
LITAF-219ENST00000576334 GTF2IRD2Q86UP8 949 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 VRK2Q86Y07 508 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 CCDC103Q8IW40 242 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 KIRREL3Q8IZU9 778 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 RAB3IL1Q8TBN0 382 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 PIWIL2Q8TC59 973 aaKnown RBP10.55□□□□□ -0.72
LITAF-219ENST00000576334 ST8SIA1Q92185 356 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 NEUROG1Q92886 237 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 PLPPR2Q96GM1 343 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 TRNT1Q96Q11 434 aaKnown RBP10.55□□□□□ -0.72
LITAF-219ENST00000576334 RSPO3Q9BXY4 272 aaPredicted RBP10.55□□□□□ -0.72
LITAF-219ENST00000576334 POLE3Q9NRF9 147 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 SDR39U1Q9NRG7 319 aaPredicted RBP10.55□□□□□ -0.72
LITAF-219ENST00000576334 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.55□□□□□ -0.72
LITAF-219ENST00000576334 SLC35A3Q9Y2D2 325 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 USH1CQ9Y6N9 552 aa10.55□□□□□ -0.72
LITAF-219ENST00000576334 TMEM72A0PK05 275 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 ZC3H12DA2A288 527 aaKnown RBP10.54□□□□□ -0.72
LITAF-219ENST00000576334 AGAP5A6NIR3 686 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 GJE1A6NN92 205 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 UBDO15205 165 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 CYTIPO60759 359 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 LYZL6O75951 148 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 GUSBP08236 651 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 NR2F1P10589 423 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 PRG2P13727 222 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 IDO1P14902 403 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 PSMB1P20618 241 aaKnown RBP10.54□□□□□ -0.72
LITAF-219ENST00000576334 RPS4Y1P22090 263 aaKnown RBP10.54□□□□□ -0.72
LITAF-219ENST00000576334 CRATP43155 626 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 NKX6-1P78426 367 aaPredicted RBP10.54□□□□□ -0.72
LITAF-219ENST00000576334 HPCAP84074 193 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 SFRP5Q5T4F7 317 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 MRPL2Q5T653 305 aaKnown RBP10.54□□□□□ -0.72
LITAF-219ENST00000576334 EPGNQ6UW88 154 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 LRRC74BQ6ZQY2 392 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 TMPPEQ6ZT21 453 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 STK32CQ86UX6 486 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 C10orf111Q8N326 155 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 CIARTQ8N365 385 aaPredicted RBP10.54□□□□□ -0.72
LITAF-219ENST00000576334 TRIML2Q8N7C3 387 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 PERPQ96FX8 193 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 BCO1Q9HAY6 547 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 SERINC1Q9NRX5 453 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 CHST2Q9Y4C5 530 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 ARID1AO14497 2285 aa10.54□□□□□ -0.72
LITAF-219ENST00000576334 ZANQ9Y493 2812 aa10.53□□□□□ -0.72
LITAF-219ENST00000576334 TMED7-TICAM2A0A0A6YYA0 188 aa10.53□□□□□ -0.72
LITAF-219ENST00000576334 SLCO1B7G3V0H7 640 aa10.53□□□□□ -0.72
LITAF-219ENST00000576334 KLF11O14901 512 aa10.53□□□□□ -0.72
LITAF-219ENST00000576334 ANP32DO95626 131 aa10.53□□□□□ -0.72
LITAF-219ENST00000576334 IL6P05231 212 aa10.53□□□□□ -0.72
LITAF-219ENST00000576334 BCHEP06276 602 aa10.53□□□□□ -0.72
LITAF-219ENST00000576334 PABPC4LP0CB38 370 aaKnown RBP10.53□□□□□ -0.72
LITAF-219ENST00000576334 IMPDH2P12268 514 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms