RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 PRSS58Q8IYP2 241 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 POGLUT1Q8NBL1 392 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 SLC38A9Q8NBW4 561 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 OR4C3Q8NH37 302 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 NUBPLQ8TB37 319 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 BRIX1Q8TDN6 353 aaKnown RBP13.4□□□□□ -0.26
COMMD4-221ENST00000567935 EXTL1Q92935 676 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 UBE2FQ969M7 185 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 VMP1Q96GC9 406 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 GAL3ST4Q96RP7 486 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 DOK1Q99704 481 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 SLC19A3Q9BZV2 496 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 OCIAD1Q9NX40 245 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 ERVK-18Q9QC07 812 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 GPN3Q9UHW5 284 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-221ENST00000567935 NTNG1Q9Y2I2 539 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 RPL36Q9Y3U8 105 aaKnown RBP13.4□□□□□ -0.26
COMMD4-221ENST00000567935 A0A1W2PNU3 283 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 UNC119BA6NIH7 251 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 C9J4A7 227 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 EFSO43281 561 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 TSPAN2O60636 221 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 REM1O75628 298 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 TRMUO75648 421 aaKnown RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 PPM1BO75688 479 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 FAM87AP0C7U9 286 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 UBL4AP11441 157 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 GSTT1P30711 240 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 SLC5A2P31639 672 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 EFNA3P52797 238 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 RIPPLY3P57055 190 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 RAB15P59190 212 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 EMX1Q04741 257 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 PLCXD2Q0VAA5 305 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 EFR3AQ14156 821 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 SMN1Q16637 294 aaKnown RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 ALG10BQ5I7T1 473 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 SYT6Q5T7P8 510 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 TMEM205Q6UW68 189 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 AHSA2Q719I0 299 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 KIF18BQ86Y91 864 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 NLGN4XQ8N0W4 816 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 STX19Q8N4C7 294 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 ZNF321PQ8N8H1 164 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 OR5L2Q8NGL0 311 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 RAB2BQ8WUD1 216 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 EFHD2Q96C19 240 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 LPAR4Q99677 370 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 CMKLR1Q99788 373 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 GPA33Q99795 319 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 ZPBPQ9BS86 351 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 STRADBQ9C0K7 418 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 C12orf10Q9HB07 376 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 HHATLQ9HCP6 504 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 TBC1D23Q9NUY8 699 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 CNIH4Q9P003 139 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 BAIAP2Q9UQB8 552 aa13.39□□□□□ -0.27
COMMD4-221ENST00000567935 UTP20O75691 2785 aaKnown RBP13.39□□□□□ -0.27
COMMD4-221ENST00000567935 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 OR6C70A6NIJ9 312 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 ZNF264O43296 627 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 EIF4E2O60573 245 aaKnown RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 HCN1O60741 890 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 BCAS1O75363 584 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 CSO75390 466 aaKnown RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 MT-ND2P03891 347 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 PNMTP11086 282 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 IFI30P13284 250 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 NAGAP17050 411 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 SLC15A1P46059 708 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 ST13P50502 369 aaKnown RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 EFNB1P98172 346 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 CLN3Q13286 438 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 IGFBP7Q16270 282 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 UBE2UQ5VVX9 321 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 RNLSQ5VYX0 342 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 WBP2NLQ6ICG8 309 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 LINC00114Q6XXX2 140 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 HSDL2Q6YN16 418 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 LANCL3Q6ZV70 420 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 CPEB2Q7Z5Q1 589 aaKnown RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 ERI1Q8IV48 349 aaKnown RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 MISPQ8IVT2 679 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 NFAM1Q8NET5 270 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-221ENST00000567935 OR2T33Q8NG76 320 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 OR52L1Q8NGH7 329 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 TMEM163Q8TC26 289 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 FAR1Q8WVX9 515 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 SGCDQ92629 289 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 GGHQ92820 318 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 ISOC1Q96CN7 298 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 BPIFA2Q96DR5 249 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 SPSB2Q99619 263 aa13.38□□□□□ -0.27
COMMD4-221ENST00000567935 ARHGAP9Q9BRR9 750 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms