RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 SAMD8Q96LT4 415 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 DEPDC7Q96QD5 511 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 PELOQ9BRX2 385 aaKnown RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 YTHDF1Q9BYJ9 559 aaKnown RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 CXorf56Q9H5V9 222 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 TRIM45Q9H8W5 580 aaPredicted RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 PARD6AQ9NPB6 346 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 UBQLN4Q9NRR5 601 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 COPS7AQ9UBW8 275 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 PCDHGA5Q9Y5G8 931 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 DOCK10Q96BY6 2186 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 TRAV27A0A087WT01 109 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 A0A0B4J2E0 115 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 A0A1B0GX12 115 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 FRG2CA6NGY1 282 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 GTPBP1O00178 669 aaKnown RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 TSPAN2O60636 221 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 FADS2O95864 444 aaKnown RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 LCKP06239 509 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 GP1BAP07359 652 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 UMODP07911 640 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CCDC159P0C7I6 412 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 ZNF883P0CG24 379 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 MASP1P48740 699 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CDC42P60953 191 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CDK5Q00535 292 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 ST3GAL4Q11206 333 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 TSPAN31Q12999 210 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD9-217ENST00000565832 SLC35F1Q5T1Q4 408 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 FNDC7Q5VTL7 733 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 SLX4IPQ5VYV7 408 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 SMARCD3Q6STE5 483 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CD300LDQ6UXZ3 194 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 SLC29A4Q7RTT9 530 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CPEB2Q7Z5Q1 589 aaKnown RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 SLCO6A1Q86UG4 719 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CLVS1Q8IUQ0 354 aaPredicted RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 GRAMD2AQ8IUY3 354 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 TMCO5AQ8N6Q1 288 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 ZNF441Q8N8Z8 693 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 OR4Q3Q8NH05 313 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 PIGXQ8TBF5 258 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 GNPDA2Q8TDQ7 276 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 BPIFA2Q96DR5 249 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 LOXL4Q96JB6 756 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 NPAS1Q99742 590 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CMKLR1Q99788 373 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 COPS4Q9BT78 406 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 EDEM2Q9BV94 578 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 ARMC7Q9H6L4 198 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 TMEM27Q9HBJ8 222 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 GALNT9Q9HCQ5 603 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 FBXO8Q9NRD0 319 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 POLE3Q9NRF9 147 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 TUBA8Q9NY65 449 aaPredicted RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 PISDQ9UG56 409 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.69□□□□□ -1.56e-8■■■□□ 15.1
CHD9-217ENST00000565832 HIF3AQ9Y2N7 669 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 PTRH2Q9Y3E5 179 aaKnown RBP5.69□□□□□ -1.5
CHD9-217ENST00000565832 HSPE1-MOB4S4R3N1 261 aa5.69□□□□□ -1.5
CHD9-217ENST00000565832 CEP295Q9C0D2 2601 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 TRBV11-1A0A0K0K1C0 115 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 FAM183AA6NL82 134 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 CLCA1A8K7I4 914 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 DLL1O00548 723 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 SCDO00767 359 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 HCRTR2O43614 444 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 SCO2O43819 266 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 OR2J2O76002 312 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 KLK3P07288 261 aaPredicted RBP5.68□□□□□ -1.5
CHD9-217ENST00000565832 SAGP10523 405 aaPredicted RBP5.68□□□□□ -1.5
CHD9-217ENST00000565832 TBXA2RP21731 343 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 IL12BP29460 328 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 IFNA8P32881 189 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 GP2P55259 537 aaKnown RBP5.68□□□□□ -1.5
CHD9-217ENST00000565832 EFNB1P98172 346 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 ZNF117Q03924 483 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 PLCXD2Q0VAA5 305 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 COX10Q12887 443 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 SKP2Q13309 424 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 INPP5JQ15735 1006 aaPredicted RBP5.68□□□□□ -1.5
CHD9-217ENST00000565832 SNAPC1Q16533 368 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 ZBED5Q49AG3 693 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 C12orf73Q69YU5 71 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 GTF2IRD2BQ6EKJ0 949 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 RAB11FIP2Q7L804 512 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 GPR141Q7Z602 305 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 GTF2IRD2Q86UP8 949 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 SVOPQ8N4V2 548 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 BBS1Q8NFJ9 593 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 OR13C2Q8NGS9 318 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 DUSP19Q8WTR2 217 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 FAR1Q8WVX9 515 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 PMM1Q92871 262 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 ZNF566Q969W8 418 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 LRR1Q96L50 414 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 TNFRSF13CQ96RJ3 184 aa5.68□□□□□ -1.5
CHD9-217ENST00000565832 ZNF559Q9BR84 538 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms