RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 BMP7P18075 431 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 ELK1P19419 428 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TNFRSF1BP20333 461 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 MMP11P24347 488 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 MAOBP27338 520 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 AGTR1P30556 359 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 CALCRP30988 508 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 PRKAR1BP31321 381 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TRIM23P36406 574 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TSFMP43897 325 aaKnown RBP7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TGM4P49221 684 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 CCR9P51686 369 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 CLCNKAP51800 687 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 ADPRHP54922 357 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 PUDPQ08623 228 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 GSG1Q2KHT4 349 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 PGGHGQ32M88 737 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 ZNF385BQ569K4 471 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 ZNF648Q5T619 568 aaPredicted RBP7.95□□□□□ -1.14
CCDC33-209ENST00000560565 AADACL4Q5VUY2 407 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 PEAR1Q5VY43 1037 aaPredicted RBP7.95□□□□□ -1.14
CCDC33-209ENST00000560565 PGAP1Q75T13 922 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 OVCH1Q7RTY7 1134 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TMEM17Q86X19 198 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 PDZD9Q8IXQ8 264 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 STPG2Q8N412 459 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 SAMD12Q8N8I0 201 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 ZNF485Q8NCK3 441 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 OR2T4Q8NH00 348 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 OR14C36Q8NHC7 312 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 FAM174AQ8TBP5 190 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 DNASE2BQ8WZ79 361 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 RAD51AP1Q96B01 352 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 SLC6A18Q96N87 628 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TREX2Q9BQ50 279 aaPredicted RBP7.95□□□□□ -1.14
CCDC33-209ENST00000560565 YIPF4Q9BSR8 244 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 EDEM2Q9BV94 578 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TMED9Q9BVK6 235 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TEX101Q9BY14 249 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 SLC17A9Q9BYT1 436 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 SLC6A16Q9GZN6 736 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 PCED1AQ9H1Q7 454 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 B3GAT2Q9NPZ5 323 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 TMEM9BQ9NQ34 198 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 DLL4Q9NR61 685 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 SUSD2Q9UGT4 822 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 SLC6A14Q9UN76 642 aa7.95□□□□□ -1.14
CCDC33-209ENST00000560565 MDC1Q14676 2089 aaKnown RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 A0A1W2PQU0 124 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 DAPL1A0PJW8 107 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 PRAMEF25A6NGN4 478 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 C4orf47A7E2U8 309 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 NUDT19A8MXV4 375 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 C10orf142B7Z368 130 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TEX46H3BTG2 121 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 M0R129 80 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TSPAN4O14817 238 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SURF4O15260 269 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 FLRT2O43155 660 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 EEF1E1O43324 174 aaKnown RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 GPRIN2O60269 458 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 KHDRBS3O75525 346 aaKnown RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 C1orf105O95561 183 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SLC16A8O95907 504 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 IFNGP01579 166 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 KLK1P06870 262 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SYPP08247 313 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RAB40ALP0C0E4 278 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 IFNGR1P15260 489 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 PPP3CBP16298 524 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RAB3BP20337 219 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 NFYAP23511 347 aaPredicted RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SSTR4P31391 388 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 FEN1P39748 380 aaKnown RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 MNDAP41218 407 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 CCR5P51681 352 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 NRG3P56975 720 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TSPAN5P62079 268 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TBPL1P62380 186 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 CDK3Q00526 305 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TGM3Q08188 693 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 FGL1Q08830 312 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 CAMK2DQ13557 499 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 OPCMLQ14982 345 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 P2RY14Q15391 338 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 MPPED2Q15777 294 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 ZSWIM7Q19AV6 140 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 UBE2NLQ5JXB2 153 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 PRAMEF14Q5SWL7 426 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 PRAMEF13Q5VWM6 474 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 KHDRBS2Q5VWX1 349 aaKnown RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TMEM65Q6PI78 240 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SMARCD3Q6STE5 483 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 ZER1Q7Z7L7 766 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 GLRX5Q86SX6 157 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RANBP3LQ86VV4 465 aaPredicted RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 C17orf64Q86WR6 236 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 UBE2J2Q8N2K1 259 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 FTMTQ8N4E7 242 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms