RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.42□□□□□ -1.54
HERC1-208ENST00000560462 RNF128Q8TEB7 428 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 DPF1Q92782 380 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 ISOC1Q96CN7 298 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 REXO5Q96IC2 774 aaKnown RBP5.42□□□□□ -1.54
HERC1-208ENST00000560462 RNF157Q96PX1 679 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 GPHA2Q96T91 129 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 KCNS3Q9BQ31 491 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 TBCDQ9BTW9 1192 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 AICDAQ9GZX7 198 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 PAIP1Q9H074 479 aaKnown RBP5.42□□□□□ -1.54
HERC1-208ENST00000560462 NDST4Q9H3R1 872 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 MSL2Q9HCI7 577 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 MRPL47Q9HD33 250 aaKnown RBP5.42□□□□□ -1.54
HERC1-208ENST00000560462 NKIRAS2Q9NYR9 191 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 NDUFAF4Q9P032 175 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 RWDD2AQ9UIY3 292 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 KCNG2Q9UJ96 466 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 NFU1Q9UMS0 254 aa5.42□□□□□ -1.54
HERC1-208ENST00000560462 A0A1W2PPH5 198 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 CTAGE15A4D2H0 777 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 B4DXG7 233 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 FGF17O60258 216 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 PLOD3O60568 738 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 UGT2B11O75310 529 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 DUS4LO95620 317 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 GOT2P00505 430 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 CLPSP04118 112 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 YES1P07947 543 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 MELTFP08582 738 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 F7P08709 466 aaPredicted RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 SSTR4P31391 388 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 SKIV2L2P42285 1042 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 RAB10P61026 200 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 UBE2HP62256 183 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 IGLV3-21P80748 117 aaPredicted RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 MRPS11P82912 194 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 KCNJ11Q14654 390 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 KLHL38Q2WGJ6 581 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 AARS2Q5JTZ9 985 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 REP15Q6BDI9 236 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 LRRC70Q7Z2Q7 622 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 SPATA21Q7Z572 469 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 GALNT5Q7Z7M9 940 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 CTAGE6Q86UF2 777 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 COMTD1Q86VU5 262 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 GSPT2Q8IYD1 628 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 C1orf174Q8IYL3 243 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 NIPA2Q8N8Q9 360 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 C17orf47Q8NEP4 570 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 ZFP28Q8NHY6 868 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 TBC1D15Q8TC07 691 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 TFB1MQ8WVM0 346 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 CKAP2Q8WWK9 683 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 YIPF5Q969M3 257 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 ADIPOR1Q96A54 375 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 TMCO6Q96DC7 493 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 OMA1Q96E52 524 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 FAM71F1Q96KD3 344 aaPredicted RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 VAT1Q99536 393 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 CHID1Q9BWS9 393 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 SLC25A32Q9H2D1 315 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 MMP26Q9NRE1 261 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 EHD3Q9NZN3 535 aa5.41□□□□□ -1.54
HERC1-208ENST00000560462 LIMA1Q9UHB6 759 aaKnown RBP5.41□□□□□ -1.54
HERC1-208ENST00000560462 FAM90A18PA6NE21 464 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 FAM90A16PA6NEW6 464 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 C3orf70A6NLC5 250 aaPredicted RBP5.4□□□□□ -1.54
HERC1-208ENST00000560462 FAM90A9PA6NNJ1 464 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 FAM90A5PA8MXJ8 464 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 POC1B-GALNT4F8VUJ3 575 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 TNFSF11O14788 317 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 FOXH1O75593 365 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 RP2O75695 350 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 TSPAN9O75954 239 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 FAM90A15PP0C7V4 464 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 FAM90A14PP0C7W9 464 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 NPR2P20594 1047 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 CERS1P27544 350 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 PLA2G16P53816 162 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 POLR2FP61218 127 aaKnown RBP5.4□□□□□ -1.54
HERC1-208ENST00000560462 PLCXD2Q0VAA5 305 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 BIKQ13323 160 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 POU6F1Q14863 301 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 LARS2Q15031 903 aaKnown RBP5.4□□□□□ -1.54
HERC1-208ENST00000560462 NNATQ16517 81 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 KCNMB1Q16558 191 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 BAK1Q16611 211 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 TPD52L1Q16890 204 aaPredicted RBP5.4□□□□□ -1.54
HERC1-208ENST00000560462 ATG16L1Q676U5 607 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 SLC9A4Q6AI14 798 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 HBMQ6B0K9 141 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 OR7E24Q6IFN5 339 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 AFTPHQ6ULP2 937 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 GDPGP1Q6ZNW5 385 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 LUZP1Q86V48 1076 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 KLHDC8AQ8IYD2 350 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 CDK20Q8IZL9 346 aa5.4□□□□□ -1.54
HERC1-208ENST00000560462 GALNT4Q8N4A0 578 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms