RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RAP2AP10114 183 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 UQCRBP14927 111 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 IL11P20809 199 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 RYKP34925 604 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 LIMS1P48059 325 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 LHX2P50458 406 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 CLDN15P56746 228 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 BCL2A1Q16548 175 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 COLEC12Q5KU26 742 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 C1orf146Q5VVC0 180 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 ULK3Q6PHR2 472 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 YRDCQ86U90 279 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 OFCC1Q8IZS5 231 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 TMCO5AQ8N6Q1 288 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 PIK3C3Q8NEB9 887 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 VANGL1Q8TAA9 524 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 ADAMTS16Q8TE57 1224 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 DNAJA4Q8WW22 397 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC47A1Q96FL8 570 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 ADGRG7Q96K78 797 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 PIGQQ9BRB3 760 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 PRDM14Q9GZV8 571 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC6A15Q9H2J7 730 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 ARMC1Q9NVT9 282 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 SPRR3Q9UBC9 169 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 DKKL1Q9UK85 242 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC13A4Q9UKG4 626 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF835Q9Y2P0 537 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF337Q9Y3M9 751 aa13.37□□□□□ -0.27
SNRPA1-207ENST00000559309 UBR5O95071 2799 aaPredicted RBP13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 IGKV1D-42A0A075B6H8 117 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 A0A087WUJ7 227 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 TRAPPC13A5PLN9 417 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 OR14I1A6ND48 311 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 SHISA8B8ZZ34 492 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 J3KTA2 159 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF208O43345 1280 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 CHP2O43745 196 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 ACTL6AO96019 429 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 IGF2P01344 180 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 GP1BBP13224 206 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 EDN3P14138 238 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 CPN1P15169 458 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 BMP7P18075 431 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 RHCEP18577 417 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 TACR3P29371 465 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 CCR4P51679 360 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 POLR2HP52434 150 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 HMGA2P52926 109 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 CDH12P55289 794 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 CLDN18P56856 261 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 RAC1P63000 192 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 EGR4Q05215 589 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 NFATC3Q12968 1075 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 PIN1Q13526 163 aaPredicted RBP13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 KPNB1Q14974 876 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 CTU2Q2VPK5 515 aaKnown RBP13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 DCST1Q5T197 706 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 WDR88Q6ZMY6 472 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 FKBP9P1Q75LS8 142 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 GGNQ86UU5 652 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 LRGUKQ96M69 825 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 DEFB127Q9H1M4 99 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 ANKRD19PQ9H560 264 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 CTPS2Q9NRF8 586 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 AP4B1Q9Y6B7 739 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 DNAJC13O75165 2243 aa13.36□□□□□ -0.27
SNRPA1-207ENST00000559309 MED12Q93074 2177 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 TRGV5A0A0B4J1U4 118 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 A0A1W2PRQ8 180 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 ERICH4A6NGS2 130 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 NPIPA5E9PKD4 350 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 GMFGO60234 142 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 CIB2O75838 187 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 FABP3P05413 133 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF708P17019 499 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 FKBP2P26885 142 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC7A1P30825 629 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 CLK1P49759 484 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 COPZ1P61923 177 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 SELENBP1Q13228 472 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 DGCR6Q14129 220 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 FAM98BQ52LJ0 330 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 GDF7Q7Z4P5 450 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 ADGRE4PQ86SQ3 457 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 ZDHHC21Q8IVQ6 265 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 GHDCQ8N2G8 530 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 OR14L1PQ8NHC6 308 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF563Q8TA94 476 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 MPP4Q96JB8 637 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 SEPHS2Q99611 448 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 TIMP4Q99727 224 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 TMEM27Q9HBJ8 222 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 AGPAT4Q9NRZ5 378 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 RIMS3Q9UJD0 308 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 NPIPA1Q9UND3 350 aa13.35□□□□□ -0.27
SNRPA1-207ENST00000559309 TMED7-TICAM2A0A0A6YYA0 188 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 CPSF4LA6NMK7 179 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms