RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SMAD9O15198 467 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 DNPH1O43598 174 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 OR12D1P0DN82 309 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 LBPP18428 481 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 HTR3AP46098 478 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 SLC1A6P48664 564 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 KHKP50053 298 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 TXNL4AP83876 142 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 BSPH1Q075Z2 132 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 GNA13Q14344 377 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 PDK3Q15120 406 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 STK11Q15831 433 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 CLEC12BQ2HXU8 276 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 TIMM23BQ5SRD1 257 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF619Q8N2I2 560 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 UBE2J2Q8N2K1 259 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 ARFGAP2Q8N6H7 521 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF781Q8N8C0 355 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 ROPN1LQ96C74 230 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 QRSL1Q9H0R6 528 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 LIPT1Q9Y234 373 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 HDGFL3Q9Y3E1 203 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
SNRPA1-204ENST00000558020 JMJD1CQ15652 2540 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 USF3Q68DE3 2245 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 C9JVG2 144 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 OVOL3O00110 214 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 ITM2AO43736 263 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 KIAA0513O60268 411 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 LYZL6O75951 148 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 TP53P04637 393 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 UQCRBP14927 111 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 S100A3P33764 101 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 RYKP34925 604 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 PGM1P36871 562 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 MAP2K6P52564 334 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 KCNJ10P78508 379 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 LRRC74AQ0VAA2 488 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 STX3Q13277 289 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 TNK1Q13470 666 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 VEZF1Q14119 521 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 GPAT3Q53EU6 434 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 FBXW9Q5XUX1 488 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 GRINAQ7Z429 371 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 CROCCP2Q86T23 111 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 ANKRD46Q86W74 232 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 CLEC4FQ8N1N0 589 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 DEPDC4Q8N2C3 294 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 LILRB1Q8NHL6 650 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 PIGXQ8TBF5 258 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 PMM1Q92871 262 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 RAB8BQ92930 207 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF775Q96BV0 537 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 NEURL3Q96EH8 262 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 PKNOX2Q96KN3 472 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 SAP130Q9H0E3 1048 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 SERHL2Q9H4I8 314 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 BARX1Q9HBU1 254 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 EXOSC3Q9NQT5 275 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 PARPBPQ9NWS1 579 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 CISD1Q9NZ45 108 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 MARCOQ9UEW3 520 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 CHRNA9Q9UGM1 479 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 ING1Q9UK53 422 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 PRDM4Q9UKN5 801 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
SNRPA1-204ENST00000558020 IGKV3D-15A0A087WSY6 115 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 CIB4A0PJX0 185 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 DPRXA6NFQ7 191 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 CCT8L1PA6NM43 557 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 H6PDO95479 791 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 PMS2P2O95744 297 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 DANCRP0C864 163 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 MAGEA8P43361 318 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 CASP9P55211 416 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 CASP8Q14790 479 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 SAXO2Q658L1 398 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 OR7E24Q6IFN5 339 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 TYW3Q6IPR3 259 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 TNFAIP8L2Q6P589 184 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 KLHL17Q6TDP4 642 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 TMEM108Q6UXF1 575 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 CMIPQ8IY22 773 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 MREGQ8N565 214 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF75CPQ92670 426 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF524Q96C55 264 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 HS6ST2Q96MM7 605 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 TRNT1Q96Q11 434 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF300Q96RE9 604 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 SLC35A5Q9BS91 424 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 CCDC106Q9BWC9 280 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 TRIM2Q9C040 744 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms