RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ZNF716A6NP11 495 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 LSM1O15116 133 aaKnown RBP11.51□□□□□ -0.57
XRCC3-212ENST00000555231 SCAMP2O15127 329 aaKnown RBP11.51□□□□□ -0.57
XRCC3-212ENST00000555231 EIF4E2O60573 245 aaKnown RBP11.51□□□□□ -0.57
XRCC3-212ENST00000555231 PLIN3O60664 434 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 C6orf47O95873 294 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 TFPIP10646 304 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 LAMP1P11279 417 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 HPCAL1P37235 193 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 ASMTP46597 345 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 EFNA4P52798 201 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 SESN3P58005 492 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 DNAJB13P59910 316 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 NAA20P61599 178 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 MERTKQ12866 999 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 GPR68Q15743 365 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 GABRA6Q16445 453 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 ABLIM2Q6H8Q1 611 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 ZNF544Q6NX49 715 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 R3HCC1LQ7Z5L2 792 aaKnown RBP11.51□□□□□ -0.57
XRCC3-212ENST00000555231 OR56A1Q8NGH5 318 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 OR52E4Q8NGH9 312 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 OR5AK3PQ8NH89 298 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 OR5P2Q8WZ92 322 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 ARL8AQ96BM9 186 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 FBXO17Q96EF6 278 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 PRR14Q9BWN1 585 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 OXSMQ9NWU1 459 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 EMC3Q9P0I2 261 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 ATP6V1HQ9UI12 483 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
XRCC3-212ENST00000555231 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 ETV2O00321 342 aaPredicted RBP11.5□□□□□ -0.57
XRCC3-212ENST00000555231 ITGA5P08648 1049 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 CSF3P09919 207 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 NEFHP12036 1026 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 CPA3P15088 417 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 THBS2P35442 1172 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 PDLIM4P50479 330 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 RPS26P62854 115 aaKnown RBP11.5□□□□□ -0.57
XRCC3-212ENST00000555231 CSNK2A1P68400 391 aaPredicted RBP11.5□□□□□ -0.57
XRCC3-212ENST00000555231 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 CHRNB3Q05901 458 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 SKP2Q13309 424 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 CARTPTQ16568 116 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 WHAMMP3Q1A5X7 153 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 SYT14P1Q58G82 188 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 MTDHQ86UE4 582 aaKnown RBP11.5□□□□□ -0.57
XRCC3-212ENST00000555231 DDIASQ8IXT1 998 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 WDR31Q8NA23 367 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 MSI2Q96DH6 328 aaKnown RBP11.5□□□□□ -0.57
XRCC3-212ENST00000555231 MUS81Q96NY9 551 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 SDF2Q99470 211 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 LAT2Q9GZY6 243 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 EML4Q9HC35 981 aaKnown RBP11.5□□□□□ -0.57
XRCC3-212ENST00000555231 SERINC1Q9NRX5 453 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 ASB6Q9NWX5 421 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 TAS2R16Q9NYV7 291 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 DNAJC15Q9Y5T4 150 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
XRCC3-212ENST00000555231 PMF1-BGLAPU3KQ54 211 aa11.5□□□□□ -0.57
XRCC3-212ENST00000555231 IGHV4-61A0A0C4DH41 118 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 VWC2LB2RUY7 222 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 TMEM233B4DJY2 109 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 ATP6V1G2-DDX39BF2Z307 99 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 MRPL33O75394 65 aaKnown RBP11.49□□□□□ -0.57
XRCC3-212ENST00000555231 KRT16P08779 473 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 UBTFL6P0CB48 400 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-212ENST00000555231 APEHP13798 732 aaKnown RBP11.49□□□□□ -0.57
XRCC3-212ENST00000555231 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-212ENST00000555231 SOAT1P35610 550 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 PDK3Q15120 406 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 CCDC153Q494R4 210 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 KANK2Q63ZY3 851 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 TRMT10CQ7L0Y3 403 aaKnown RBP11.49□□□□□ -0.57
XRCC3-212ENST00000555231 CCDC103Q8IW40 242 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 CLEC4FQ8N1N0 589 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 ST8SIA1Q92185 356 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 ARL5BQ96KC2 179 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 SORCS2Q96PQ0 1159 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 GATA5Q9BWX5 397 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-212ENST00000555231 FKRPQ9H9S5 495 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 CTPS2Q9NRF8 586 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 ACER3Q9NUN7 267 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 MKLN1Q9UL63 735 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 TMED5Q9Y3A6 229 aa11.49□□□□□ -0.57
XRCC3-212ENST00000555231 PIP5K1BO14986 540 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 CFLARO15519 480 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 KIAA0513O60268 411 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 FCMRO60667 390 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 DNAJA2O60884 412 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 PEX11AO75192 247 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 CHEK2O96017 543 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 CSTAP01040 98 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 FAM153BP0C7A2 387 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 BMP4P12644 408 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 DDX5P17844 614 aaKnown RBP11.48□□□□□ -0.57
XRCC3-212ENST00000555231 PGCP20142 388 aa11.48□□□□□ -0.57
XRCC3-212ENST00000555231 CCNA2P20248 432 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms