RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 CHRNB3Q05901 458 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 SLC34A1Q06495 639 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 KCNAB2Q13303 367 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 CMPK2Q5EBM0 449 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF766Q5HY98 468 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 COLEC12Q5KU26 742 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 PRICKLE2Q7Z3G6 844 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 PROX1Q92786 737 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 RSRC1Q96IZ7 334 aaKnown RBP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF597Q96LX8 424 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 DCBLD2Q96PD2 775 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 NIPSNAP1Q9BPW8 284 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 GABARAPL3Q9BY60 117 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 COQ10BQ9H8M1 238 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZFP64Q9NPA5 681 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ACKR4Q9NPB9 350 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 PTPRZ1P23471 2315 aaPredicted RBP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF208O43345 1280 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 CST1P01037 141 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ASAH2BP0C7U1 165 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 IMPDH2P12268 514 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 MAKP20794 623 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 SRD5A2P31213 254 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 UQCRC1P31930 480 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 IDH2P48735 452 aaKnown RBP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 LHX2P50458 406 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 CXADRP78310 365 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 H3F3AP84243 136 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 MERTKQ12866 999 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 INAQ16352 499 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 PLEKHN1Q494U1 663 aaPredicted RBP6.1□□□□□ -1.43
LINC00517-202ENST00000554257 LPCAT4Q643R3 524 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 OR5M10Q6IEU7 315 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 PPP4R4Q6NUP7 873 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 MBOAT2Q6ZWT7 520 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZER1Q7Z7L7 766 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 TMEM251Q8N6I4 163 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 OR6S1Q8NH40 331 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 OR5K1Q8NHB7 308 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 FBLIM1Q8WUP2 373 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 LZICQ8WZA0 190 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZBTB8AQ96BR9 441 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 TBL1XR1Q9BZK7 514 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 CTPS2Q9NRF8 586 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 QPCTLQ9NXS2 382 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 SPRR3Q9UBC9 169 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 OAZ3Q9UMX2 235 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF232Q9UNY5 417 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 SLC9A8Q9Y2E8 581 aa6.1□□□□□ -1.43
LINC00517-202ENST00000554257 CBR3O75828 277 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 GASTP01350 101 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 FCGR1AP12314 374 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 FPR1P21462 350 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 ELK4P28324 431 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 DNAJA1P31689 397 aaKnown RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 RFX3P48380 749 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 PMP22Q01453 160 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 PPP1R8Q12972 351 aaKnown RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 BROXQ5VW32 411 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 ULK3Q6PHR2 472 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 DEF8Q6ZN54 512 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 TMPRSS11FQ6ZWK6 438 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 CCDC71Q8IV32 467 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 OR9Q2Q8NGE9 314 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 MRGPRX4Q96LA9 322 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 TRIM2Q9C040 744 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 SEMA6AQ9H2E6 1030 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 METTL7AQ9H8H3 244 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 TIMMDC1Q9NPL8 285 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 PPP4R1LQ9P1A2 415 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 ING1Q9UK53 422 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 AURKCQ9UQB9 309 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 TESMINQ9Y4I5 508 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 HPRP00739 348 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 ITGA2P17301 1181 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 CLDN18P56856 261 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 RGS8P57771 180 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 GPR85P60893 370 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF169Q14929 603 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 LAPTM4AQ15012 233 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 NADK2Q4G0N4 442 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 SLC6A19Q695T7 634 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 KLHL17Q6TDP4 642 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 USP51Q70EK9 711 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 GRINAQ7Z429 371 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 RANBP3LQ86VV4 465 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 SVOPLQ8N434 492 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 TMEM156Q8N614 296 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 OR1J4Q8NGS1 313 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 ACOT11Q8WXI4 607 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 CNTNAP3BQ96NU0 1288 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 CNTNAP3Q9BZ76 1288 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 SLC19A3Q9BZV2 496 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 KLRF1Q9NZS2 232 aa6.09□□□□□ -1.43
LINC00517-202ENST00000554257 KLF13Q9Y2Y9 288 aaPredicted RBP6.09□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF814B7Z6K7 855 aa6.09□□□□□ -1.44
LINC00517-202ENST00000554257 PDLIM1O00151 329 aa6.09□□□□□ -1.44
LINC00517-202ENST00000554257 ADAMDEC1O15204 470 aa6.09□□□□□ -1.44
LINC00517-202ENST00000554257 HCRTR2O43614 444 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms