RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TIGARQ9NQ88 270 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 CTPS2Q9NRF8 586 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 PAQR5Q9NXK6 330 aaPredicted RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 CHRNA9Q9UGM1 479 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 EGFL7Q9UHF1 273 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 MAGEL2Q9UJ55 1249 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 PACSIN3Q9UKS6 424 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
TUBB3-202ENST00000553656 SH3GLB1Q9Y371 365 aa12.48□□□□□ -0.41
TUBB3-202ENST00000553656 GTF3C1Q12789 2109 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 TMED7-TICAM2A0A0A6YYA0 188 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 CLCA1A8K7I4 914 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 M0R3H8 397 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 GYG2O15488 501 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 ZNF682O95780 498 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 OPN1LWP04000 364 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 NCK1P16333 377 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 CCNA2P20248 432 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 IL11P20809 199 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 CD247P20963 164 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 CXCR1P25024 350 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 RASSF2P50749 326 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 MAP2K6P52564 334 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 SMSP52788 366 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 DLX5P56178 289 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 HOXC5Q00444 222 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 TMEM176BQ3YBM2 270 aaPredicted RBP12.47□□□□□ -0.41
TUBB3-202ENST00000553656 HBMQ6B0K9 141 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 GLYATQ6IB77 296 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 PPP4R4Q6NUP7 873 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 RPTNQ6XPR3 784 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 P4HA3Q7Z4N8 544 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 GGNQ86UU5 652 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 COMTD1Q86VU5 262 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 LACC1Q8IV20 430 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 FAM156AQ8NDB6 213 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 OR2V1Q8NHB1 315 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 RNF217Q8TC41 542 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 RND1Q92730 232 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 ERRFI1Q9UJM3 462 aaPredicted RBP12.47□□□□□ -0.41
TUBB3-202ENST00000553656 RPS6KA6Q9UK32 745 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 TMED7Q9Y3B3 224 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 POLEQ07864 2286 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 HEATR5AQ86XA9 2040 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 PCNX3Q9H6A9 2034 aa12.47□□□□□ -0.41
TUBB3-202ENST00000553656 CD8B2A6NJW9 211 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 ELOA3DA6NLF2 546 aaPredicted RBP12.46□□□□□ -0.41
TUBB3-202ENST00000553656 TNFSF11O14788 317 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 FMO6PO60774 539 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SEMA7AO75326 666 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 ATP5HO75947 161 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SYNGR4O95473 234 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 STAMBPO95630 424 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 EPPINO95925 133 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SERPINA1P01009 418 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 ZNF136P52737 540 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SUCLG1P53597 346 aaKnown RBP12.46□□□□□ -0.41
TUBB3-202ENST00000553656 CRYBA2P53672 197 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 CLDN15P56746 228 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SELENOWP63302 87 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 PMPCAQ10713 525 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 BNIP2Q12982 314 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 NRF1Q16656 503 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 ELOA3BQ3SY89 546 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SYT14P1Q58G82 188 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 NSUN5P2Q63ZY6 315 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 FKBP9P1Q75LS8 142 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 CARM1Q86X55 608 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 ELOA3Q8NG57 546 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 OR10Q1Q8NGQ4 319 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 OR10D3Q8NH80 312 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 DNAJA4Q8WW22 397 aaPredicted RBP12.46□□□□□ -0.41
TUBB3-202ENST00000553656 ZNF524Q96C55 264 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 DDIT4LQ96D03 193 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 CCDC120Q96HB5 630 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 OR5B2Q96R09 309 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 DMRTA2Q96SC8 542 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 MCHR1Q99705 422 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 PRRG4Q9BZD6 226 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 CALHM2Q9HA72 323 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 TAS2R1Q9NYW7 299 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 COQ3Q9NZJ6 369 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 CD300AQ9UGN4 299 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 OSGIN1Q9UJX0 560 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 MCTS1Q9ULC4 181 aaKnown RBP12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SAMD4AQ9UPU9 718 aaKnown RBP12.46□□□□□ -0.41
TUBB3-202ENST00000553656 FAM215AQ9Y5M1 114 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
TUBB3-202ENST00000553656 A0A1B0GWA3 101 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 SLC22A20A6NK97 555 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 H0YC42 278 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 ADAMDEC1O15204 470 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 ZNF208O43345 1280 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 GLI4P10075 376 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 PNMTP11086 282 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 FCGR2AP12318 317 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 HTR2AP28223 471 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 IFNA8P32881 189 aa12.45□□□□□ -0.42
TUBB3-202ENST00000553656 CLK1P49759 484 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms