RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MRPL2Q5T653 305 aaKnown RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 EEF1A1P5Q5VTE0 462 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 ADGRG3Q86Y34 549 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 FUNDC1Q8IVP5 155 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 MSRB3Q8IXL7 192 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 ZNF563Q8TA94 476 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 MAL2Q969L2 176 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 CPNE4Q96A23 557 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 S100PBPQ96BU1 408 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 ACTR6Q9GZN1 396 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 PAIP1Q9H074 479 aaKnown RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 GSX1Q9H4S2 264 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-206ENST00000553529 AGAP5A6NIR3 686 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 FRS3O43559 492 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 IGHV3-9P01782 118 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 NR2F1P10589 423 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 TFPIP10646 304 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 CRATP43155 626 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 FOXG1P55316 489 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-206ENST00000553529 HPCAP84074 193 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 SYT14P1Q58G82 188 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 C6orf10Q5SRN2 563 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 PDSS1Q5T2R2 415 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 C3orf33Q6P1S2 294 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 COMTD1Q86VU5 262 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 CCDC103Q8IW40 242 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 KIRREL3Q8IZU9 778 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 GABRG1Q8N1C3 465 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 TRNT1Q96Q11 434 aaKnown RBP16.18■□□□□ 0.18
SHMT2-206ENST00000553529 SMR3AQ99954 134 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 TMUB1Q9BVT8 246 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 SLC25A37Q9NYZ2 338 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 ZIM2Q9NZV7 527 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 STOML1Q9UBI4 398 aa16.18■□□□□ 0.18
SHMT2-206ENST00000553529 ADAP00813 363 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 PGCP20142 388 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 HOXC5Q00444 222 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 PAGE3Q5JUK9 113 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 TMEM201Q5SNT2 666 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 TGIF2LYQ8IUE0 185 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 CLIP4Q8N3C7 705 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 ARFGAP2Q8N6H7 521 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 SLC38A5Q8WUX1 472 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 WDR60Q8WVS4 1066 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 ST8SIA1Q92185 356 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 GTF2H4Q92759 462 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 NEUROG1Q92886 237 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 TPT1P8Q9HAU6 139 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 SLC52A3Q9NQ40 469 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 POLE3Q9NRF9 147 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-206ENST00000553529 PAQR5Q9NXK6 330 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-206ENST00000553529 SLC35A3Q9Y2D2 325 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 PCDHB14Q9Y5E9 798 aa16.17■□□□□ 0.18
SHMT2-206ENST00000553529 SLCO1B7G3V0H7 640 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 SULT2B1O00204 365 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 NR5A2O00482 541 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 CYTIPO60759 359 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 LYZL6O75951 148 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 PRKD3O94806 890 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 AGR2O95994 175 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 IL6P05231 212 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 IMPDH2P12268 514 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 TACR3P29371 465 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 AQP5P55064 265 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 RAC3P60763 192 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 RASGEF1BQ0VAM2 473 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 SF3A3Q12874 501 aaKnown RBP eCLIP16.16■□□□□ 0.181e-13■■■□□ 16.4
SHMT2-206ENST00000553529 BNIP2Q12982 314 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 GSTA3Q16772 222 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 SEZ6L2Q6UXD5 910 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 LRRC74BQ6ZQY2 392 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 TMPPEQ6ZT21 453 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 MIER2Q8N344 545 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 TRIML2Q8N7C3 387 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 GLB1L3Q8NCI6 653 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-206ENST00000553529 PLPPR2Q96GM1 343 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 TMEM19Q96HH6 336 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 REXO5Q96IC2 774 aaKnown RBP16.16■□□□□ 0.18
SHMT2-206ENST00000553529 C7orf26Q96N11 449 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 IKZF5Q9H5V7 419 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 TCF7L2Q9NQB0 619 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 ZNF226Q9NYT6 803 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 CHRNA9Q9UGM1 479 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 OSGIN1Q9UJX0 560 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 DSPPQ9NZW4 1301 aa16.16■□□□□ 0.18
SHMT2-206ENST00000553529 TMED7-TICAM2A0A0A6YYA0 188 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 GJE1A6NN92 205 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 SOX30O94993 753 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 ANP32DO95626 131 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 YES1P07947 543 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 GUSBP08236 651 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 TFPTP0C1Z6 253 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 CD99P14209 185 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 DSTNP60981 165 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 EPS8Q12929 822 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 AP1ARQ63HQ0 302 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 ABLIM2Q6H8Q1 611 aa16.15■□□□□ 0.18
SHMT2-206ENST00000553529 LRRC8CQ8TDW0 803 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms