RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PHF11Q9UIL8 331 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 CA5BQ9Y2D0 317 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 A0A1B0GWB2 263 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 BTBD17A6NE02 478 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 CDX4O14627 284 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-209ENST00000553280 OR10H3O60404 316 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 KLHL41O60662 606 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 PFKFB2O60825 505 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 LYPD3O95274 346 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 ZNF883P0CG24 379 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 ETS2P15036 469 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 PGAM2P15259 253 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 HMGB2P26583 209 aaKnown RBP3.89□□□□□ -1.79
SCFD1-209ENST00000553280 ADORA2BP29275 332 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 FGF9P31371 208 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-209ENST00000553280 MAGEA9P43362 315 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 CRYBB1P53674 252 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-209ENST00000553280 IST1P53990 364 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 MRPL28Q13084 256 aaKnown RBP3.89□□□□□ -1.79
SCFD1-209ENST00000553280 PLD1Q13393 1074 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 RUNX3Q13761 415 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 KLHL38Q2WGJ6 581 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 SLC22A6Q4U2R8 563 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 HSP90AB3PQ58FF7 597 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 ARMC12Q5T9G4 340 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 CCDC137Q6PK04 289 aaKnown RBP3.89□□□□□ -1.79
SCFD1-209ENST00000553280 EGFL6Q8IUX8 553 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 OR2L13Q8N349 312 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 RAB3IL1Q8TBN0 382 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 PSMG2Q969U7 264 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 TIMD4Q96H15 378 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 RANBP9Q96S59 729 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 PDE10AQ9Y233 779 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 TMED5Q9Y3A6 229 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 PPIAL4AQ9Y536 164 aa3.89□□□□□ -1.79
SCFD1-209ENST00000553280 A0A1W2PPE3 182 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 FRG2CA6NGY1 282 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 ZNF705EA8MWA4 302 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-209ENST00000553280 GOLGA8SH3BPF8 625 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 HAS3O00219 553 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 PHF1O43189 567 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-209ENST00000553280 HCN1O60741 890 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 UPK3AO75631 287 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 ATP5LO75964 103 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 DUSP14O95147 198 aaKnown RBP3.88□□□□□ -1.79
SCFD1-209ENST00000553280 RNH1P13489 461 aaKnown RBP3.88□□□□□ -1.79
SCFD1-209ENST00000553280 FOLR2P14207 255 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 COX5AP20674 150 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 QARSP47897 775 aaKnown RBP3.88□□□□□ -1.79
SCFD1-209ENST00000553280 HLCSP50747 726 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 PRMT2P55345 433 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 RPS14P62263 151 aaKnown RBP3.88□□□□□ -1.79
SCFD1-209ENST00000553280 ASAH1Q13510 395 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 SERTAD2Q14140 314 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 DMRTC1Q5HYR2 192 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 METTL11BQ5VVY1 283 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 SLC22A10Q63ZE4 541 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 ZNF772Q68DY9 489 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-209ENST00000553280 UTS2BQ765I0 119 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 SERINC5Q86VE9 423 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 PAQR7Q86WK9 346 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 ECHDC2Q86YB7 292 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 POM121L12Q8N7R1 296 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 ST8SIA1Q92185 356 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 MS4A14Q96JA4 679 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 OR5M11Q96RB7 305 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 APOL2Q9BQE5 337 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 CHIAQ9BZP6 476 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 GFRA4Q9GZZ7 299 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 SLITRK2Q9H156 845 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 RAB20Q9NX57 234 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 SLC2A8Q9NY64 477 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 CLSPNQ9HAW4 1339 aa3.88□□□□□ -1.79
SCFD1-209ENST00000553280 PPIAL4EA0A075B759 164 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 IGKV3D-15A0A087WSY6 115 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 HEATR9A2RTY3 570 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 TRDCB7Z8K6 153 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 GPAA1O43292 621 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 WBP4O75554 376 aaKnown RBP3.87□□□□□ -1.79
SCFD1-209ENST00000553280 TBX6O95947 436 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-209ENST00000553280 LALBAP00709 142 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 AGTP01019 485 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 LGALS2P05162 132 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 SLC35E2P0CK97 266 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 PPIAL4FP0DN26 164 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 IL2RGP31785 369 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 EPHX2P34913 555 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 KIR2DS2P43631 304 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 GYG1P46976 350 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 ATP5OP48047 213 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 TPMTP51580 245 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 RIPK4P57078 832 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 ZFP36L1Q07352 338 aaKnown RBP3.87□□□□□ -1.79
SCFD1-209ENST00000553280 SRSF5Q13243 272 aaKnown RBP3.87□□□□□ -1.79
SCFD1-209ENST00000553280 GK3PQ14409 553 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 RCN1Q15293 331 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 OLFML2AQ68BL7 652 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 OR5M10Q6IEU7 315 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 UQCC3Q6UW78 93 aa3.87□□□□□ -1.79
SCFD1-209ENST00000553280 C2orf66Q6UXQ4 117 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms