RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GGTLC2Q14390 218 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 SQLEQ14534 574 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 WHAMMP3Q1A5X7 153 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 GALNTL6Q49A17 601 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 RFTN2Q52LD8 501 aaPredicted RBP12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 SYT14P1Q58G82 188 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 FAM120AOSQ5T036 256 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 LIPNQ5VXI9 398 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 RNF165Q6ZSG1 346 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 MTDHQ86UE4 582 aaKnown RBP12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 OR2T11Q8NH01 316 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 OR5P2Q8WZ92 322 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 MOAP1Q96BY2 351 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 TRMOQ9BU70 441 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 QRSL1Q9H0R6 528 aaKnown RBP12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 ATAD3AQ9NVI7 634 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 OXSMQ9NWU1 459 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 TBK1Q9UHD2 729 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 FIS1Q9Y3D6 152 aa12.47□□□□□ -0.41
CHMP1A-210ENST00000551981 A0A1W2PR80 420 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 SERINC4A6NH21 518 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 LSM1O15116 133 aaKnown RBP12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 SCAMP2O15127 329 aaKnown RBP12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 MRPL33O75394 65 aaKnown RBP12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 CYP7B1O75881 506 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 LINC00032P0C843 101 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 BCKDHAP12694 445 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 PGCP20142 388 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 MAPK1P28482 360 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 APOBEC3AP31941 199 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 SKP2Q13309 424 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 GABRA6Q16445 453 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 LSM12Q3MHD2 195 aaKnown RBP12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 PDZK1Q5T2W1 519 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 C17orf53Q8N3J3 647 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 NATD1Q8N6N6 113 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 PSMA8Q8TAA3 256 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 PIGXQ8TBF5 258 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 SFXN5Q8TD22 340 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF524Q96C55 264 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 MUS81Q96NY9 551 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 THUMPD3Q9BV44 507 aaKnown RBP12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 NMUR2Q9GZQ4 415 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 LAT2Q9GZY6 243 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 GPATCH2Q9NW75 528 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 MALT1Q9UDY8 824 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 ATP6V1HQ9UI12 483 aa12.46□□□□□ -0.41
CHMP1A-210ENST00000551981 ESPNB1AK53 854 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 RIPK2O43353 540 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 DNPH1O43598 174 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 PLIN3O60664 434 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 URI1O94763 535 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 TFPIP10646 304 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 APEHP13798 732 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 CPA3P15088 417 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 CCT5P48643 541 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 SESN3P58005 492 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 PHC1P78364 1004 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 SRSF2Q01130 221 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 C1QTNF12Q5T7M4 302 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 LIPMQ5VYY2 423 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 BHLHB9Q6PI77 547 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 IL17RELQ6ZVW7 336 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 DDIASQ8IXT1 998 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 C17orf78Q8N4C9 275 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 OR7A2PQ8NGA2 310 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 MZB1Q8WU39 189 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 C1QTNF6Q9BXI9 259 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 ACER3Q9NUN7 267 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 AMDHD2Q9Y303 409 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 TRAF6Q9Y4K3 522 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 KCNE3Q9Y6H6 103 aa12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 NUP214P35658 2090 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-210ENST00000551981 ZNF716A6NP11 495 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 VWC2LB2RUY7 222 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 ANKRD28O15084 1053 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 DNAJA2O60884 412 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 LY6HO94772 140 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 PMS2P2O95744 297 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 AK1P00568 194 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 CSTAP01040 98 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 PGRP06401 933 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 LAMP1P11279 417 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 FKBP2P26885 142 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 APOBEC1P41238 236 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 NR4A2P43354 598 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 MAGEA8P43361 318 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 SNRPD2P62316 118 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 TGFBR3Q03167 851 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 GPR68Q15743 365 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 KANK2Q63ZY3 851 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 EIF3MQ7L2H7 374 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 C1orf162Q8NEQ5 155 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 C3orf49Q96BT1 292 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 MSI2Q96DH6 328 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms