RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 RAMP1O60894 148 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 DNAJC8O75937 253 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 RCBTB2O95199 551 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 PABPC4LP0CB38 370 aaKnown RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 HNRNPCL4P0DMR1 293 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 TMIGD3P0DMS9 266 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 COX4I1P13073 169 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 EDNRAP25101 427 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 HTR2AP28223 471 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 MAGEA8P43361 318 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 KIR2DL2P43627 348 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 PCBP3P57721 371 aaKnown RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 SIRPAP78324 504 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 TXNL4AP83876 142 aaKnown RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 MERTKQ12866 999 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 CBFBQ13951 182 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 SCARB2Q14108 478 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 BTLAQ7Z6A9 289 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 GRAMD2AQ8IUY3 354 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 MEIOBQ8N635 442 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 OR4D11Q8NGI4 311 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 OR2V1Q8NHB1 315 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 ASB5Q8WWX0 329 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 OSTF1Q92882 214 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 ARL5BQ96KC2 179 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 MRGPRX4Q96LA9 322 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 KLHL15Q96M94 604 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 SPATA9Q9BWV2 254 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 TMEM38AQ9H6F2 299 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 RNF122Q9H9V4 155 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 EXOSC3Q9NQT5 275 aaKnown RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 CMTM6Q9NX76 183 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 COQ3Q9NZJ6 369 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 OSGIN1Q9UJX0 560 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 ING1Q9UK53 422 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-208ENST00000550283 NOTCH2Q04721 2471 aa10.04□□□□□ -0.8
RAB5B-208ENST00000550283 TMEM72A0PK05 275 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 HSPB2A8KAH6 182 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 MFN2O95140 757 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 CGAP01215 116 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 PGCP20142 388 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 ENPP1P22413 925 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 SLC6A2P23975 617 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 CTSSP25774 331 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 GCKP35557 465 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 ANXA11P50995 505 aaKnown RBP10.03□□□□□ -0.8
RAB5B-208ENST00000550283 BNIP2Q12982 314 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 CYLC2Q14093 348 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-208ENST00000550283 NPTX1Q15818 432 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 HSPB2Q16082 182 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 LIN52Q52LA3 116 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 ZNF311Q5JNZ3 666 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 RNF220Q5VTB9 566 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 HBMQ6B0K9 141 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 REEP3Q6NUK4 255 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 C8orf82Q6P1X6 216 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-208ENST00000550283 RBM45Q8IUH3 476 aaKnown RBP10.03□□□□□ -0.8
RAB5B-208ENST00000550283 PEX5LQ8IYB4 626 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 SMYD1Q8NB12 490 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 BBS10Q8TAM1 723 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 ABHD3Q8WU67 409 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 ST8SIA1Q92185 356 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 TAMM41Q96BW9 452 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 STARD4Q96DR4 205 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 ZNF583Q96ND8 569 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 GPATCH1Q9BRR8 931 aaKnown RBP10.03□□□□□ -0.8
RAB5B-208ENST00000550283 JKAMPQ9P055 326 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 APCP25054 2843 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 HRNRQ86YZ3 2850 aaPredicted RBP10.03□□□□□ -0.8
RAB5B-208ENST00000550283 TACC2O95359 2948 aa10.03□□□□□ -0.8
RAB5B-208ENST00000550283 INTS1Q8N201 2190 aaKnown RBP10.02□□□□□ -0.8
RAB5B-208ENST00000550283 LRBAP50851 2863 aa10.02□□□□□ -0.8
RAB5B-208ENST00000550283 CFAP73A6NFT4 308 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 LINC01387J3KSC0 135 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 AIM2O14862 343 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 SMAD9O15198 467 aaKnown RBP10.02□□□□□ -0.81
RAB5B-208ENST00000550283 IL2RAP01589 272 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 THBS1P07996 1170 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 IMPDH2P12268 514 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 TNFRSF1BP20333 461 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 CD247P20963 164 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 PTNP21246 168 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 FUT4P22083 530 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 PPIBP23284 216 aaKnown RBP10.02□□□□□ -0.81
RAB5B-208ENST00000550283 ELK4P28324 431 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 ADH6P28332 368 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 TACR3P29371 465 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 NTF4P34130 210 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 EIF1P41567 113 aaKnown RBP10.02□□□□□ -0.81
RAB5B-208ENST00000550283 CPA2P48052 419 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 RIPPLY3P57055 190 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 KRTAP10-9P60411 292 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 SELENBP1Q13228 472 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 ZNF239Q16600 458 aaKnown RBP10.02□□□□□ -0.81
RAB5B-208ENST00000550283 DUSP7Q16829 419 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 CYP51A1Q16850 503 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 PRAMEF8Q5VWM4 474 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 PRAMEF7Q5VXH5 474 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 PPP4R4Q6NUP7 873 aa10.02□□□□□ -0.81
RAB5B-208ENST00000550283 ZNF474Q6S9Z5 364 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms