RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 KLHL28Q9NXS3 571 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 NDOR1Q9UHB4 597 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 WASF3Q9UPY6 502 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 H7C1Q1 480 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 RTCAO00442 366 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 FRS3O43559 492 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 PYCR1P32322 319 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 EIF2S3P41091 472 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 CDH4P55283 916 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 AP3S2P59780 193 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 ACTR1AP61163 376 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 SREBF2Q12772 1141 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 ECH1Q13011 328 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 SLBPQ14493 270 aaKnown RBP eCLIP11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 AGTRAPQ6RW13 159 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 ZNF322Q6U7Q0 402 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 CPOQ8IVL8 374 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 OR5W2Q8NH69 310 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 STOML3Q8TAV4 291 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 THEM6Q8WUY1 208 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 SCAMP4Q969E2 229 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 RFKQ969G6 155 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 PPP1R16AQ96I34 528 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 TRPV2Q9Y5S1 764 aa11.11□□□□□ -0.63
RBFOX1-208ENST00000547372 hCG_1809904A0A1W2PP81 198 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 A0A1W2PR64 198 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 A0A1W2PRV1 198 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 SYT5O00445 386 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 CXCL11O14625 94 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ETHE1O95571 254 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ACTL6AO96019 429 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 IDSP22304 550 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 EPHA4P54764 986 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 PSMD4P55036 377 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 RNF4P78317 190 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ZNF155Q12901 538 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 XKR4Q5GH76 650 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 DHRS7BQ6IAN0 325 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ZNF683Q8IZ20 524 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 PNPLA2Q96AD5 504 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 MYEOVQ96EZ4 313 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 BACE2Q9Y5Z0 518 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 A0A0U1RQF3 1178 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 TMEM82A0PJX8 343 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ACP5P13686 325 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 PRPH2P23942 346 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 THBS2P35442 1172 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 AQP2P41181 271 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ZC3H14Q6PJT7 736 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 CLEC9AQ6UXN8 241 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 LRRC70Q7Z2Q7 622 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 TGIF2LXQ8IUE1 241 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 CMTM4Q8IZR5 234 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 MUC20Q8N307 709 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 NXPE1Q8N323 547 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 OR52N2Q8NGI0 321 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ABHD4Q8TB40 342 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 C14orf144Q96I85 54 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 MGME1Q9BQP7 344 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ALG8Q9BVK2 526 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 C1GALT1Q9NS00 363 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ZCCHC3Q9NUD5 404 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 COMMD9Q9P000 198 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 KCNE1BA0A087WTH5 132 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 A6NLC8 198 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 M0R036 132 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 CCSO14618 274 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 HYAL3O43820 417 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 PRAMEF4O60810 478 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 UBBP0CG47 229 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 UBCP0CG48 685 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 S100A2P29034 98 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 MPIP34949 423 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ANXA11P50995 505 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 RAG2P55895 527 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 PPIAP62937 165 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 PRAMEF9Q5VWM5 478 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 MMP21Q8N119 569 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 OR4D11Q8NGI4 311 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 TMEM19Q96HH6 336 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 FUBP3Q96I24 572 aaKnown RBP eCLIP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 FAM46AQ96IP4 442 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
RBFOX1-208ENST00000547372 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 IRGMA1A4Y4 181 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 OR2M5A3KFT3 312 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 GLOD5A6NK44 160 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 KRT33AO76009 404 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 IGSF6O95976 241 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 PMP2P02689 132 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 C8GP07360 202 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 HEXBP07686 556 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 GNSP15586 552 aa11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-208ENST00000547372 MINDY4Q4G0A6 757 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms