RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 AVPP01185 164 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 ALOX5P09917 674 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 EPHA1P21709 976 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 PCMT1P22061 227 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 GPC1P35052 558 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 SERPINB4P48594 390 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 CCR4P51679 360 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 SLC16A1P53985 500 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 FOXA1P55317 472 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 EFNB3Q15768 340 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 PDCD2Q16342 344 aaPredicted RBP8.15□□□□□ -1.1
CHD4-212ENST00000545083 TSNAXIP1Q2TAA8 658 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 TIGD2Q4W5G0 525 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 HIKESHIQ53FT3 197 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 ZNF678Q5SXM1 525 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 TSPO2Q5TGU0 170 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 VHLLQ6RSH7 139 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 ZDHHC24Q6UX98 284 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 TREML4Q6UXN2 200 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 CASP12Q6UXS9 341 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 USP43Q70EL4 1123 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 MTDHQ86UE4 582 aaKnown RBP8.15□□□□□ -1.1
CHD4-212ENST00000545083 GLCCI1Q86VQ1 547 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 CARM1Q86X55 608 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 CCDC103Q8IW40 242 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 OR5W2Q8NH69 310 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 FBXO25Q8TCJ0 367 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 JADE3Q92613 823 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 CDS1Q92903 461 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 TMEM186Q96B77 213 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 BTBD2Q9BX70 525 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 RAB1BQ9H0U4 201 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 HIF1ANQ9NWT6 349 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 DCTN4Q9UJW0 460 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 USP22Q9UPT9 525 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 KCNE3Q9Y6H6 103 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 SERTM1A2A2V5 107 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 NPIPB8E9PQR5 432 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 GTPBP1O00178 669 aaKnown RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 WNT9BO14905 357 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 PDE5AO76074 875 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 IFNGR1P15260 489 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 EFNA1P20827 205 aaPredicted RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 FRKP42685 505 aaPredicted RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 SESN3P58005 492 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 PRPS1P60891 318 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 CSNK2A1P68400 391 aaPredicted RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 SYT14P1Q58G82 188 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 NOXRED1Q6NXP6 359 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 CDC73Q6P1J9 531 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 SHISA2Q6UWI4 295 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 IKBIPQ70UQ0 350 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 TMCO5AQ8N6Q1 288 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 ZNF614Q8N883 585 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 ZDHHC22Q8N966 263 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 C1orf162Q8NEQ5 155 aaPredicted RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 CLDND2Q8NHS1 167 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 UBASH3BQ8TF42 649 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 WDR60Q8WVS4 1066 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 NEU4Q8WWR8 484 aaPredicted RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 ARL5BQ96KC2 179 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 SLC38A2Q96QD8 506 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 DOK1Q99704 481 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 SAP130Q9H0E3 1048 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 SEC61A2Q9H9S3 476 aa8.14□□□□□ -1.11
CHD4-212ENST00000545083 SIRT3Q9NTG7 399 aaPredicted RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 WBP11Q9Y2W2 641 aaKnown RBP8.14□□□□□ -1.11
CHD4-212ENST00000545083 LOC105371242A0A075B767 164 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 CENPVL1A0A0U1RR11 272 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 TMEM129A0AVI4 362 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 FAM187AA6NFU0 413 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 hCG_2039718K7EN88 272 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 GPR171O14626 319 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 ZNF264O43296 627 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 AKAP10O43572 662 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 DNAJA2O60884 412 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 HSPA4LO95757 839 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 HMGN2P05204 90 aaKnown RBP8.13□□□□□ -1.11
CHD4-212ENST00000545083 ENO1P06733 434 aaKnown RBP8.13□□□□□ -1.11
CHD4-212ENST00000545083 MSMBP08118 114 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 ARAFP10398 606 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 TFPIP10646 304 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 UBL4AP11441 157 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 CDH2P19022 906 aaPredicted RBP8.13□□□□□ -1.11
CHD4-212ENST00000545083 ATP6V1C1P21283 382 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 CALCRP30988 508 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 ASMTP46597 345 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 LIMS1P48059 325 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 ATP12AP54707 1039 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 NAAAQ02083 359 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 HGFACQ04756 655 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 MERTKQ12866 999 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 SCGB2A2Q13296 93 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 SKP2Q13309 424 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 CBFBQ13951 182 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 LASP1Q14847 261 aaKnown RBP8.13□□□□□ -1.11
CHD4-212ENST00000545083 TEX35Q5T0J7 233 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 HIST2H2BDQ6DRA6 164 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 ZCCHC12Q6PEW1 402 aa8.13□□□□□ -1.11
CHD4-212ENST00000545083 SHQ1Q6PI26 577 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms