RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 IRF3Q14653 427 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 GANABQ14697 944 aaKnown RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 SSPNQ14714 243 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 SMN1Q16637 294 aaKnown RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 RGS21Q2M5E4 152 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 KLHL26Q53HC5 615 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 ATP1A1-AS1Q5TC04 95 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 C1orf94Q6P1W5 598 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 HSDL2Q6YN16 418 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 NDUFAF7Q7L592 441 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 IQCF2Q8IXL9 164 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 PRR22Q8IZ63 422 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 OR9Q2Q8NGE9 314 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 OR6T1Q8NGN1 323 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 CHPT1Q8WUD6 406 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 HGDQ93099 445 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 GTPBP3Q969Y2 492 aaKnown RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 TP53INP1Q96A56 240 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 NACC2Q96BF6 587 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 EFHD2Q96C19 240 aaPredicted RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 GAL3ST4Q96RP7 486 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 FUZQ9BT04 418 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 MTHFD2LQ9H903 347 aaPredicted RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 Q9N2J8 555 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 KRCC1Q9NPI7 259 aaPredicted RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 MAN2C1Q9NTJ4 1040 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 P4HTMQ9NXG6 502 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 GALNT8Q9NY28 637 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 C19orf25Q9UFG5 118 aaPredicted RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 ERGIC3Q9Y282 383 aa6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 ZNF443Q9Y2A4 671 aaPredicted RBP6.42□□□□□ -1.38
HMGCS2-204ENST00000544913 TRABD2BA6NFA1 517 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 TAF4O00268 1085 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 FADS1O60427 444 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 HPP00738 406 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 IGHEP01854 428 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 ALPPP05187 535 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 LIPCP11150 499 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 HTR2AP28223 471 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 RBMS1P29558 406 aaKnown RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 OTX2P32243 289 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 SLC15A1P46059 708 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 NR0B1P51843 470 aaKnown RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 SMSP52788 366 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 COPZ1P61923 177 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 DCAF7P61962 342 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 ST3GAL3Q11203 375 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 CLN3Q13286 438 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 KRR1Q13601 381 aaKnown RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 ATP1A4Q13733 1029 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 ZNHIT3Q15649 155 aaPredicted RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 GPR68Q15743 365 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 CD226Q15762 336 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 KLHL22Q53GT1 634 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 ENTPD8Q5MY95 495 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 PDZK1Q5T2W1 519 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 C12orf73Q69YU5 71 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 H3F3CQ6NXT2 135 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 DEF8Q6ZN54 512 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 RRM2BQ7LG56 351 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 SLC46A3Q7Z3Q1 461 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 VASH2Q86V25 355 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 SLC34A3Q8N130 599 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 FAM26EQ8N5C1 309 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 TMCO5AQ8N6Q1 288 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 OR6Q1Q8NGQ2 317 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 OR9Q1Q8NGQ5 310 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 OR52P1PQ8NH57 321 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 M1APQ8TC57 530 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 GNPDA2Q8TDQ7 276 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 THAP3Q8WTV1 239 aaPredicted RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 CNOT9Q92600 299 aaKnown RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 DIO2Q92813 273 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 OMA1Q96E52 524 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 TMEM80Q96HE8 168 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 SLX1AQ9BQ83 275 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 PRR14Q9BWN1 585 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 POLDIP3Q9BY77 421 aaKnown RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 ARMC7Q9H6L4 198 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 SLC25A19Q9HC21 320 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 ZNF160Q9HCG1 818 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 DNAJB12Q9NXW2 375 aaKnown RBP6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 MYOTQ9UBF9 498 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 COPS7AQ9UBW8 275 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 REV1Q9UBZ9 1251 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 SEC14L4Q9UDX3 406 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 OSGIN1Q9UJX0 560 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 A4GNTQ9UNA3 340 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 CFL2Q9Y281 166 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 NTNG1Q9Y2I2 539 aa6.41□□□□□ -1.38
HMGCS2-204ENST00000544913 TRBV4-1A0A0J9YWV2 114 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 PNMA8CA0A1B0GUJ8 204 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ISPDA4D126 451 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 WWP2O00308 870 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 CCRL2O00421 344 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 EFSO43281 561 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 DYRK3O43781 588 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ICOSLGO75144 302 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 WISP1O95388 367 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 UTS2O95399 124 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms