RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CLHC1Q8NHS4 586 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 TMEM234Q8WY98 164 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 APH1AQ96BI3 265 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 NMUR2Q9GZQ4 415 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 OXSMQ9NWU1 459 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 MALT1Q9UDY8 824 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 NOSIPQ9Y314 301 aaKnown RBP23.56■■□□□ 1.36
CHFR-218ENST00000540963 ARFGEF3Q5TH69 2177 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 SVEP1Q4LDE5 3571 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 SULT2B1O00204 365 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 NDUFS8O00217 210 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 GPR171O14626 319 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 AZIN1O14977 448 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 IGFBP5P24593 272 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 HPCAL1P37235 193 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 SPOCK1Q08629 439 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 ZNF614Q8N883 585 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 RFWD2Q8NHY2 731 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 OR5P2Q8WZ92 322 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 HTRA1Q92743 480 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 MOAP1Q96BY2 351 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 LAT2Q9GZY6 243 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 FKRPQ9H9S5 495 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 GPATCH2Q9NW75 528 aa23.55■■□□□ 1.36
CHFR-218ENST00000540963 CCT8L1PA6NM43 557 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 SCAMP2O15127 329 aaKnown RBP23.54■■□□□ 1.36
CHFR-218ENST00000540963 CHEK2O96017 543 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 BCKDHAP12694 445 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 HNF1AP20823 631 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 EFNA1P20827 205 aaPredicted RBP23.54■■□□□ 1.36
CHFR-218ENST00000540963 CRHR1P34998 444 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 CCR4P51679 360 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 SYT14P1Q58G82 188 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 SFXN5Q8TD22 340 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 EPS8L3Q8TE67 593 aaKnown RBP23.54■■□□□ 1.36
CHFR-218ENST00000540963 ZHX1-C8orf76Q96EF9 292 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 TRMOQ9BU70 441 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 TUBB1Q9H4B7 451 aa23.54■■□□□ 1.36
CHFR-218ENST00000540963 SERINC4A6NH21 518 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 ZNF716A6NP11 495 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 VWC2LB2RUY7 222 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 TMEM114B3SHH9 223 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 DNPH1O43598 174 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 FKBP2P26885 142 aaKnown RBP23.53■■□□□ 1.36
CHFR-218ENST00000540963 APOBEC3AP31941 199 aaPredicted RBP23.53■■□□□ 1.36
CHFR-218ENST00000540963 RNF144AP50876 292 aaPredicted RBP23.53■■□□□ 1.36
CHFR-218ENST00000540963 SLC16A1P53985 500 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 CHRNEQ04844 493 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 SKP2Q13309 424 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 TP53BP2Q13625 1128 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 GABRA6Q16445 453 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 LSM12Q3MHD2 195 aaKnown RBP23.53■■□□□ 1.36
CHFR-218ENST00000540963 C17orf78Q8N4C9 275 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 ARIH2OSQ8N7S6 290 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 SDF2Q99470 211 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 THUMPD3Q9BV44 507 aaKnown RBP23.53■■□□□ 1.36
CHFR-218ENST00000540963 ACER3Q9NUN7 267 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 ATAD3AQ9NVI7 634 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 SPIN1Q9Y657 262 aaPredicted RBP23.53■■□□□ 1.36
CHFR-218ENST00000540963 KCNE3Q9Y6H6 103 aa23.53■■□□□ 1.36
CHFR-218ENST00000540963 M0R1B8 84 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 CCT5P48643 541 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 SESN3P58005 492 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 ZNF141Q15928 474 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 FAM120AOSQ5T036 256 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 LIPMQ5VYY2 423 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 C1orf162Q8NEQ5 155 aaPredicted RBP23.52■■□□□ 1.36
CHFR-218ENST00000540963 PIGXQ8TBF5 258 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 QRSL1Q9H0R6 528 aaKnown RBP23.52■■□□□ 1.36
CHFR-218ENST00000540963 DNAJC15Q9Y5T4 150 aa23.52■■□□□ 1.36
CHFR-218ENST00000540963 SMIM23A6NLE4 172 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 PMS2P2O95744 297 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 AK1P00568 194 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 IGHV3-9P01782 118 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 LINC00032P0C843 101 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 CPA3P15088 417 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 PGCP20142 388 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 MAPK1P28482 360 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 PDLIM4P50479 330 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 SQLEQ14534 574 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 PDZK1Q5T2W1 519 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 LIPNQ5VXI9 398 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 KANK2Q63ZY3 851 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 BHLHB9Q6PI77 547 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 OR7A2PQ8NGA2 310 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 UBLCP1Q8WVY7 318 aaPredicted RBP23.51■■□□□ 1.35
CHFR-218ENST00000540963 OIT3Q8WWZ8 545 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 AMDHD2Q9Y303 409 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 FKBP7Q9Y680 259 aa23.51■■□□□ 1.35
CHFR-218ENST00000540963 MRPL33O75394 65 aaKnown RBP23.5■■□□□ 1.35
CHFR-218ENST00000540963 LAMP1P11279 417 aa23.5■■□□□ 1.35
CHFR-218ENST00000540963 APOBEC1P41238 236 aaKnown RBP23.5■■□□□ 1.35
CHFR-218ENST00000540963 CLK1P49759 484 aaKnown RBP23.5■■□□□ 1.35
CHFR-218ENST00000540963 PHC1P78364 1004 aa23.5■■□□□ 1.35
CHFR-218ENST00000540963 MERTKQ12866 999 aa23.5■■□□□ 1.35
CHFR-218ENST00000540963 SPDYE7PQ495Y7 208 aa23.5■■□□□ 1.35
CHFR-218ENST00000540963 GALNTL6Q49A17 601 aa23.5■■□□□ 1.35
CHFR-218ENST00000540963 OR7D2Q96RA2 312 aa23.5■■□□□ 1.35
CHFR-218ENST00000540963 PIMREGQ9BSJ6 248 aa23.5■■□□□ 1.35
CHFR-218ENST00000540963 MYOZ1Q9NP98 299 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms