RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FAM26EQ8N5C1 309 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 CLDN22Q8N7P3 220 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 NUBPLQ8TB37 319 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 TMEM163Q8TC26 289 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 OSTF1Q92882 214 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 DNAJA3Q96EY1 480 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 MPP4Q96JB8 637 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 TUBA1CQ9BQE3 449 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 SPRY4Q9C004 299 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 CLEC2DQ9UHP7 191 aa11.2□□□□□ -0.62
AP003559.1-201ENST00000540906 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 IGHV1-45A0A0A0MS14 117 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 SH3D21A4FU49 640 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 OR6C70A6NIJ9 312 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 H3BMQ9 156 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 HCRTR2O43614 444 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 NDUFB5O43674 189 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 DLGAP3O95886 979 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 MT-CO3P00414 261 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 SAGP10523 405 aaPredicted RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 DBTP11182 482 aaKnown RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 CCNA2P20248 432 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 RBM34P42696 430 aaKnown RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 CSNK2BP67870 215 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 EGR4Q05215 589 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 SLC35F1Q5T1Q4 408 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 DCAF12Q5T6F0 453 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 WBP2NLQ6ICG8 309 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 OR5M10Q6IEU7 315 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 PAQR6Q6TCH4 344 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 SHFQ7M4L6 423 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 ASCL5Q7RTU5 278 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 IGFN1Q86VF2 1251 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 ZNF440Q8IYI8 595 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 ELP5Q8TE02 316 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 CT55Q8WUE5 264 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 TRUB1Q8WWH5 349 aaKnown RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 RELTQ969Z4 430 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 YIPF6Q96EC8 236 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 IMMP1LQ96LU5 166 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 COG8Q96MW5 612 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 DOK1Q99704 481 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 FUNDC2Q9BWH2 189 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 HCAR1Q9BXC0 346 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 MED20Q9H944 212 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 GALNT9Q9HCQ5 603 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 CCNB1IP1Q9NPC3 277 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 HINT3Q9NQE9 182 aaKnown RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 COMMD3-BMI1R4GMX3 469 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 ZC3H12DA2A288 527 aaKnown RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 FAM183AA6NL82 134 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 KDM4EB2RXH2 506 aaPredicted RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 C9J4A7 227 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 SOCS6O14544 535 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 OR2J2O76002 312 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 DKK1O94907 266 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 ADORA3P0DMS8 318 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 PSMB9P28065 219 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 TACR3P29371 465 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 LCN1P31025 176 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 TGFBR2P37173 567 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 LTBQ06643 244 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 AQP6Q13520 282 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 SLC25A30Q5SVS4 291 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 SYT6Q5T7P8 510 aaPredicted RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 AADACL4Q5VUY2 407 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 B3GLCTQ6Y288 498 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 STX19Q8N4C7 294 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 OR2Y1Q8NGV0 311 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 MYDGFQ969H8 173 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 OR5M11Q96RB7 305 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 TBL1XR1Q9BZK7 514 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 IRF2BPLQ9H1B7 796 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 C19orf25Q9UFG5 118 aaPredicted RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 NXT1Q9UKK6 140 aaKnown RBP11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 TMEM5Q9Y2B1 443 aa11.19□□□□□ -0.62
AP003559.1-201ENST00000540906 ZFAND5O76080 213 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 PPP1R3DO95685 299 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 F8A1P23610 371 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 PTGDSP41222 190 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 COPZ1P61923 177 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 TBCEQ15813 527 aaPredicted RBP11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 BTBD16Q32M84 506 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 ZNF362Q5T0B9 420 aaPredicted RBP11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 UBE2UQ5VVX9 321 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 C1QL3Q5VWW1 255 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 PLAG1Q6DJT9 500 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 SMARCD3Q6STE5 483 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 PPP1R32Q7Z5V6 425 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 PIP4P1Q86T03 277 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 OR2T33Q8NG76 320 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 OR11G2Q8NGC1 345 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 DUSP19Q8WTR2 217 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 RNF138Q8WVD3 245 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 DNAJA4Q8WW22 397 aaPredicted RBP11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 OIT3Q8WWZ8 545 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 RORBQ92753 470 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms