RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SFXN4Q6P4A7 337 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 NUDT18Q6ZVK8 323 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 ABHD13Q7L211 337 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 PRSS45Q7RTY3 260 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 OR5M3Q8NGP4 307 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 ABHD4Q8TB40 342 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 SLC37A2Q8TED4 501 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 GHSRQ92847 366 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 ERMAPQ96PL5 475 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-210ENST00000539599 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 PDCD1LG2Q9BQ51 273 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 KLHDC3Q9BQ90 382 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 MCCC2Q9HCC0 563 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 CMC2Q9NRP2 79 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 MED31Q9Y3C7 131 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 MCIDASD6RGH6 385 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 BRINP1O60477 761 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 GPR75O95800 540 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 ADRB1P08588 477 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 PRKAR1AP10644 381 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 ARSBP15848 533 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 HIST1H1CP16403 213 aaKnown RBP12.97□□□□□ -0.33
UBE3B-210ENST00000539599 CTHP32929 405 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 TPMTP51580 245 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 POU6F2P78424 691 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-210ENST00000539599 BTG2P78543 158 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 GALEQ14376 348 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 BCL2L15Q5TBC7 163 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 GARNL3Q5VVW2 1013 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 RPLP0P6Q8NHW5 317 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 TRMT10AQ8TBZ6 339 aaKnown RBP12.97□□□□□ -0.33
UBE3B-210ENST00000539599 HMGB4Q8WW32 186 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 PGLYRP3Q96LB9 341 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 ZFP3Q96NJ6 502 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 MED17Q9NVC6 651 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 CPNE7Q9UBL6 633 aa12.97□□□□□ -0.33
UBE3B-210ENST00000539599 A0A0G2JK05 382 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 ANKRD61A6NGH8 418 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 OR10H2O60403 315 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 KIR2DS3Q14952 304 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 EIPR1Q53HC9 387 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 ALG10BQ5I7T1 473 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 C1QTNF12Q5T7M4 302 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 KIRREL2Q6UWL6 708 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 PARGQ86W56 976 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 SLC44A3Q8N4M1 653 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 CAMKVQ8NCB2 501 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 CLIP3Q96DZ5 547 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 GABRG3Q99928 467 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 ERVMER34-1Q9H9K5 563 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 TRIM36Q9NQ86 728 aa12.96□□□□□ -0.33
UBE3B-210ENST00000539599 A0A1B0GVT2 93 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 FAM172BPA6NC97 362 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 ATP1B1P05026 303 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 THBS1P07996 1170 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 ACSM3Q53FZ2 586 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 GID4Q8IVV7 300 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 CDRT4Q8N9R6 151 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 FAM98AQ8NCA5 519 aaKnown RBP12.96□□□□□ -0.34
UBE3B-210ENST00000539599 OR4C6Q8NH72 309 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 KCNJ15Q99712 375 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 THAP7Q9BT49 309 aaPredicted RBP12.96□□□□□ -0.34
UBE3B-210ENST00000539599 NDC1Q9BTX1 674 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 ASB6Q9NWX5 421 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 LRIT1Q9P2V4 623 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 POLHQ9Y253 713 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.34
UBE3B-210ENST00000539599 MAU2Q9Y6X3 613 aa12.96□□□□□ -0.34
UBE3B-210ENST00000539599 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 SELENOFO60613 162 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 HCN1O60741 890 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 GALR3O60755 368 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-210ENST00000539599 TSC22D2O75157 780 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 GALK2Q01415 458 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 TIGD4Q8IY51 512 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 DEFB119Q8N690 84 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 BEST4Q8NFU0 473 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 BAHD1Q8TBE0 780 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-210ENST00000539599 RASD2Q96D21 266 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 TSSK2Q96PF2 358 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 SLC25A18Q9H1K4 315 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 ABCG5Q9H222 651 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 FKRPQ9H9S5 495 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 COPS3Q9UNS2 423 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 IER3IP1Q9Y5U9 82 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 A0A0B4J2E0 115 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 A0A1B0GX12 115 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 TCRBV21S2A2A0A5A6 115 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 RIIAD1A6NNX1 92 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 INMT-MINDY4F8WBC2 141 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 PTP4A3O75365 173 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 SOX30O94993 753 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 HLA-DQB1P01920 261 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 PTHLHP12272 177 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 MAOAP21397 527 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 SLC2A5P22732 501 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 MLLT3P42568 568 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-210ENST00000539599 ACAA2P42765 397 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms