RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SSX8Q7RTT4 187 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OLIG3Q7RTU3 272 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 NUDCD3Q8IVD9 361 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OR4A15Q8NGL6 344 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 MIPOL1Q8TD10 442 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SLC25A43Q8WUT9 341 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF75CPQ92670 426 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ACER3Q9NUN7 267 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 TYROBPO43914 113 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 AGR2O95994 175 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 GGT1P19440 569 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 IGHV1-2P23083 117 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 EDNRAP25101 427 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ETV4P43268 484 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CASP9P55211 416 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 FAPQ12884 760 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PDCD2Q16342 344 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SYT14P1Q58G82 188 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 TIMM23BQ5SRD1 257 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ATAD3BQ5T9A4 648 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 HEPHL1Q6MZM0 1159 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 P2RY8Q86VZ1 359 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OR8J2Q8NGG1 315 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OIT3Q8WWZ8 545 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PPP1R36Q96LQ0 422 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 REG4Q9BYZ8 158 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ALG2Q9H553 416 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CISD1Q9NZ45 108 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 EMC3Q9P0I2 261 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ADAM21Q9UKJ8 722 aa17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SPIN1Q9Y657 262 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1B-204ENST00000536782 KIAA0513O60268 411 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CRLF1O75462 422 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GUSBP08236 651 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 OR12D1P0DN82 309 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TFPIP10646 304 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 COX5AP20674 150 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PGM1P36871 562 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 APOBEC1P41238 236 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 KRTAP1-1Q07627 177 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PDK3Q15120 406 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 MTDHQ86UE4 582 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 MAPK1IP1LQ8NDC0 245 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 VPS37AQ8NEZ2 397 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ZNF563Q8TA94 476 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 XAGE5Q8WWM1 108 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 DPY30Q9C005 99 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SLCO5A1Q9H2Y9 848 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 AKTIPQ9H8T0 292 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 POLE3Q9NRF9 147 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 FAIMQ9NVQ4 179 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SLC35A3Q9Y2D2 325 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 WDR45Q9Y484 360 aa17.39■□□□□ 0.37
TNFRSF1B-204ENST00000536782 IGKV3D-15A0A087WSY6 115 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PRSS51A0A1B0GVH4 220 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ANKRD28O15084 1053 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ITM2AO43736 263 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 RAMP1O60894 148 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PGM3O95394 542 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CPSF4O95639 269 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 UQCRC2P22695 453 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ACVR1BP36896 505 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 DMTNQ08495 405 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 MAPK14Q16539 360 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ANXA8L1Q5VT79 327 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ABLIM2Q6H8Q1 611 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TYW3Q6IPR3 259 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ANKRD46Q86W74 232 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 UBE2J2Q8N2K1 259 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ZNF781Q8N8C0 355 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 FAM71CQ8NEG0 241 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 RAB8BQ92930 207 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ZHX1-C8orf76Q96EF9 292 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PKNOX2Q96KN3 472 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TRAF4Q9BUZ4 470 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CCDC106Q9BWC9 280 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GRIP2Q9C0E4 1043 aa17.38■□□□□ 0.37
TNFRSF1B-204ENST00000536782 WDR91A4D1P6 747 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 OR5H1A6NKK0 313 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SHISA9B4DS77 424 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ABCD4O14678 606 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SCN2BO60939 215 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 IGHV4-39P01824 125 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TP53P04637 393 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SERPINE1P05121 402 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 THBS1P07996 1170 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 MYZAPP0CAP1 466 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 RYKP34925 604 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CDH11P55287 796 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CHI3L2Q15782 390 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 FBXW9Q5XUX1 488 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TNFAIP8L2Q6P589 184 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ZNF433Q8N7K0 673 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 APH1AQ96BI3 265 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ROPN1LQ96C74 230 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 RADILQ96JH8 1075 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 HS6ST2Q96MM7 605 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SAP130Q9H0E3 1048 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms