RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 GPR180Q86V85 440 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 LAS2Q8IYD9 372 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 DEFB107AQ8IZN7 70 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MUC15Q8N387 334 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SPATA6LQ8N4H0 392 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 C2orf73Q8N5S3 287 aaPredicted RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CSNK1A1LQ8N752 337 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PSD4Q8NDX1 1056 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 OR2L5Q8NG80 312 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 NEIL3Q8TAT5 605 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZCCHC10Q8TBK6 192 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TBC1D15Q8TC07 691 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TRPC4APQ8TEL6 797 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CHPT1Q8WUD6 406 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SLCO4A1Q96BD0 722 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PYCR2Q96C36 320 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CCDC124Q96CT7 223 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CMTM7Q96FZ5 175 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 DUS3LQ96G46 650 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SMIM10Q96HG1 83 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF597Q96LX8 424 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SORCS2Q96PQ0 1159 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 KCNC2Q96PR1 638 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 OR1F2PQ96R84 312 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF382Q96SR6 550 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 NEURL2Q9BR09 285 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TM2D3Q9BRN9 247 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SIKE1Q9BRV8 207 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TMEM79Q9BSE2 394 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TBCDQ9BTW9 1192 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ACAT2Q9BWD1 397 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MRPL1Q9BYD6 325 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SHCBP1LQ9BZQ2 653 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 DRC3Q9H069 523 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 IQCGQ9H095 443 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 HIPK2Q9H2X6 1198 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 C16orf95Q9H693 158 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 C7orf69Q9H7B7 122 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 IPPKQ9H8X2 491 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ACTR8Q9H981 624 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MARCH7Q9H992 704 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 LIN28AQ9H9Z2 209 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 BRF2Q9HAW0 419 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PLGRKTQ9HBL7 147 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MSL2Q9HCI7 577 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MKKSQ9NPJ1 570 aaPredicted RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PFDN4Q9NQP4 134 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 C14orf105Q9NVL8 296 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PNPOQ9NVS9 261 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 THAP1Q9NVV9 213 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 OXSMQ9NWU1 459 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SIRT5Q9NXA8 310 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 WWOXQ9NZC7 414 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 AHSPQ9NZD4 102 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TMEM216Q9P0N5 145 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 XPR1Q9UBH6 696 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PCTPQ9UKL6 214 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF490Q9ULM2 529 aaPredicted RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PRPF19Q9UMS4 504 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SNX6Q9UNH7 406 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MAPRE3Q9UPY8 281 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TMED5Q9Y3A6 229 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ANGPTL3Q9Y5C1 460 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 USH2AO75445 5202 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 LOC105369274A0A096LPK9 316 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 LOC102723532A0A0G2JNH3 316 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TCRBV3S1A0A5B6 114 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FUOMA2VDF0 154 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HTR3EA5X5Y0 456 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NCF1BA6NI72 391 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 A8MT66 165 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NCF1CA8MVU1 366 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SRRM5B3KS81 715 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SHISA9B4DS77 424 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SUPT3HB4E1H0 165 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 G3V3Y1 287 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 UBXN8O00124 270 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 OR7A17O14581 309 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FFAR3O14843 346 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GPR42O15529 346 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NDUFS4O43181 175 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FOXS1O43638 330 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 OR1F1O43749 312 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 LCMT2O60294 686 aaKnown RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 NPHS1O60500 1241 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GALR3O60755 368 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 PRAMEF4O60810 478 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TRIM13O60858 407 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 GUCY1B2O75343 617 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 SULT1C4O75897 302 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 BCAS2O75934 225 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 KRT6AP02538 564 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TFP02787 698 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 KRT6BP04259 564 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 HNRNPCP07910 306 aaKnown RBP eCLIP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 F7P08709 466 aaPredicted RBP2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 TFPTP0C1Z6 253 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 RFPL3SP0C7P2 107 aa2.72□□□□□ -1.97
SCARNA13-201ENST00000516672 FAM58BPP0C7Q3 252 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms