RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SLC26A5P58743 744 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 RAB15P59190 212 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 ROR2Q01974 943 aaKnown RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNF4-220ENST00000513578 PLCXD2Q0VAA5 305 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 NFATC3Q12968 1075 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 FHL1Q13642 323 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 CD226Q15762 336 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 TIGD6Q17RP2 521 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 PAPD4Q6PIY7 484 aaKnown RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 CCDC81Q6ZN84 652 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 SLC46A3Q7Z3Q1 461 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 P2RY8Q86VZ1 359 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 GID4Q8IVV7 300 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 PRSS58Q8IYP2 241 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 SLC15A4Q8N697 577 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 NANOGP1Q8N7R0 232 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 FANK1Q8TC84 345 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 PHOSPHO1Q8TCT1 267 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 GRHL3Q8TE85 626 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 RHBDD1Q8TEB9 315 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 TTC9Q92623 222 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 SGTBQ96EQ0 304 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 LRR1Q96L50 414 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 SAMD8Q96LT4 415 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 GAL3ST4Q96RP7 486 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 ADOQ96SZ5 270 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 CRB3Q9BUF7 120 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 DPH1Q9BZG8 443 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 FAM117AQ9C073 453 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 NAA50Q9GZZ1 169 aaKnown RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 AMBNQ9NP70 447 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 ISYNA1Q9NPH2 558 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 ATP13A2Q9NQ11 1180 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 CMC2Q9NRP2 79 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 DNAJC27Q9NZQ0 273 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 AKAP7Q9P0M2 348 aaPredicted RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 WARS2Q9UGM6 360 aaKnown RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 GPN3Q9UHW5 284 aaPredicted RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 LSM2Q9Y333 95 aaKnown RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 NPFFR2Q9Y5X5 522 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 ZFHX2Q9C0A1 2572 aaPredicted RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 TMEM129A0AVI4 362 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 ENO4A6NNW6 628 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 CDX4O14627 284 aaPredicted RBP7.65□□□□□ -1.18
RNF4-220ENST00000513578 ARPC3O15145 178 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 OIP5O43482 229 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 NDUFB5O43674 189 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 IDH3BO43837 385 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 MAN1A2O60476 641 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 CBFA2T3O75081 653 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 ZFAND5O76080 213 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 OR7A10O76100 309 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 NDUFB2O95178 105 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 RAB36O95755 333 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 PTHP01270 115 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 TSPAN19P0C672 248 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 PEPDP12955 493 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 APEHP13798 732 aaKnown RBP7.65□□□□□ -1.18
RNF4-220ENST00000513578 CD36P16671 472 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 ZNF28P17035 718 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 PGCP20142 388 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 PSMB9P28065 219 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 HTR1FP30939 366 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 UGT2B10P36537 528 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 MTNR1AP48039 350 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 P2RX1P51575 399 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 SUMO3P55854 103 aaPredicted RBP7.65□□□□□ -1.18
RNF4-220ENST00000513578 RPS4XP62701 263 aaKnown RBP7.65□□□□□ -1.18
RNF4-220ENST00000513578 ZNF117Q03924 483 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 DYNC1I2Q13409 638 aaKnown RBP7.65□□□□□ -1.18
RNF4-220ENST00000513578 LPAL2Q16609 132 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 ZNF318Q5VUA4 2279 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 CDCP2Q5VXM1 449 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 TCEAL6Q6IPX3 200 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 LCN10Q6JVE6 187 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 SLC30A6Q6NXT4 461 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 FAM198BQ6UWH4 519 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 C5orf46Q6UWT4 87 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 MEX3DQ86XN8 651 aaKnown RBP7.65□□□□□ -1.18
RNF4-220ENST00000513578 CPAMD8Q8IZJ3 1885 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 CADM2Q8N3J6 435 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 OR52I1Q8NGK6 324 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 OR5W2Q8NH69 310 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 ELP5Q8TE02 316 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 HGDQ93099 445 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 TCEAL3Q969E4 200 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 LGALS12Q96DT0 336 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 PLEKHA8Q96JA3 519 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 DACH2Q96NX9 599 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 GPX7Q96SL4 187 aaPredicted RBP7.65□□□□□ -1.18
RNF4-220ENST00000513578 CMKLR1Q99788 373 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 DDA1Q9BW61 102 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 MND1Q9BWT6 205 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 TAPBPLQ9BX59 468 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 STRADBQ9C0K7 418 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 ZNF700Q9H0M5 742 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 ERGIC3Q9Y282 383 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 CARD8Q9Y2G2 431 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 EXOSC1Q9Y3B2 195 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms