RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CCR4P51679 360 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 KRTAP24-1Q3LI83 254 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 PODNL1Q6PEZ8 512 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 C6orf120Q7Z4R8 191 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF525Q8N782 197 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 FAM71CQ8NEG0 241 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 OR56A1Q8NGH5 318 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 SFXN5Q8TD22 340 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 TRMOQ9BU70 441 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 CCDC106Q9BWC9 280 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 OR11A1Q9GZK7 315 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 NMUR2Q9GZQ4 415 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 CTPS2Q9NRF8 586 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 ACER3Q9NUN7 267 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 FAF1Q9UNN5 650 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-202ENST00000509637 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.99□□□□□ -0.174e-6■■■■□ 21.3
RAB40C-202ENST00000509637 ELOA3DA6NLF2 546 aaPredicted RBP13.98□□□□□ -0.17
RAB40C-202ENST00000509637 PHF1O43189 567 aaPredicted RBP13.98□□□□□ -0.17
RAB40C-202ENST00000509637 NPHS1O60500 1241 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 CYP7B1O75881 506 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 UBTFL6P0CB48 400 aaPredicted RBP13.98□□□□□ -0.17
RAB40C-202ENST00000509637 G6PDP11413 515 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 MATN1P21941 496 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 CD40P25942 277 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 HPCAL1P37235 193 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 GABRA6Q16445 453 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 ELOA3BQ3SY89 546 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 FBXW9Q5XUX1 488 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 AP1ARQ63HQ0 302 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 OR4F3Q6IEY1 312 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 GALNT5Q7Z7M9 940 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 MTDHQ86UE4 582 aaKnown RBP13.98□□□□□ -0.17
RAB40C-202ENST00000509637 ADGRG3Q86Y34 549 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 TMCO5AQ8N6Q1 288 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 ELOA3Q8NG57 546 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 OR52E4Q8NGH9 312 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 RAB8BQ92930 207 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 HS6ST2Q96MM7 605 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 TNFRSF13CQ96RJ3 184 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF350Q9GZX5 532 aa13.98□□□□□ -0.17
RAB40C-202ENST00000509637 IQCGQ9H095 443 aaKnown RBP13.98□□□□□ -0.17
RAB40C-202ENST00000509637 H3BNH8 94 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 SPAG7O75391 227 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 SKAP2O75563 359 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-202ENST00000509637 TP53P04637 393 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-202ENST00000509637 DDX5P17844 614 aaKnown RBP13.97□□□□□ -0.17
RAB40C-202ENST00000509637 CHRNEQ04844 493 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 MERTKQ12866 999 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 CBFBQ13951 182 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 MST1LQ2TV78 715 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 ARHGAP11BQ3KRB8 267 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 CHRFAM7AQ494W8 412 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 SPDYE7PQ495Y7 208 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 SYT14P1Q58G82 188 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 TYW3Q6IPR3 259 aaKnown RBP13.97□□□□□ -0.17
RAB40C-202ENST00000509637 C3orf33Q6P1S2 294 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF100Q8IYN0 542 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-202ENST00000509637 TOR1AIP2Q8NFQ8 470 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 UBLCP1Q8WVY7 318 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-202ENST00000509637 PPP3R2Q96LZ3 170 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 MUS81Q96NY9 551 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 DHRS9Q9BPW9 319 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 USB1Q9BQ65 265 aaKnown RBP13.97□□□□□ -0.17
RAB40C-202ENST00000509637 DUSP26Q9BV47 211 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 OR51I1Q9H343 314 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 MANSC1Q9H8J5 431 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 CBLN4Q9NTU7 201 aa13.97□□□□□ -0.17
RAB40C-202ENST00000509637 SLC35F4A4IF30 521 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 SULT2B1O00204 365 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 AP3D1O14617 1153 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 ITM2AO43736 263 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 CSTAP01040 98 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 OR12D1P0DN82 309 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 IGHV4-31P0DP07 118 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 IMPDH2P12268 514 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 H3F3AP84243 136 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 VLDLRP98155 873 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 LOXL1Q08397 574 aaPredicted RBP13.96□□□□□ -0.17
RAB40C-202ENST00000509637 PDK3Q15120 406 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 LSM12Q3MHD2 195 aaKnown RBP13.96□□□□□ -0.17
RAB40C-202ENST00000509637 C9orf135Q5VTT2 229 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 AGAP6Q5VW22 663 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 C10orf105Q8TEF2 133 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 ST8SIA1Q92185 356 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 MUCL1Q96DR8 90 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 RHNO1Q9BSD3 238 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 BHLHE41Q9C0J9 482 aaPredicted RBP13.96□□□□□ -0.17
RAB40C-202ENST00000509637 ALG2Q9H553 416 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 L2HGDHQ9H9P8 463 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 BARX1Q9HBU1 254 aaPredicted RBP13.96□□□□□ -0.17
RAB40C-202ENST00000509637 MKS1Q9NXB0 559 aa13.96□□□□□ -0.17
RAB40C-202ENST00000509637 TMEM114B3SHH9 223 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 CFLARO15519 480 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 LYPLA1O75608 230 aaPredicted RBP13.95□□□□□ -0.18
RAB40C-202ENST00000509637 CHEK2O96017 543 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 FAM157CP0CG43 387 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 CCNA2P20248 432 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 RYKP34925 604 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 SOAT1P35610 550 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms