RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 FAIMQ9NVQ4 179 aa12.08□□□□□ -0.48
CCHCR1-227ENST00000508852 TRPC5OSA6NMA1 111 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 SLCO1B7G3V0H7 640 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 ITM2AO43736 263 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 FCMRO60667 390 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 SCN2BO60939 215 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 CPSF4O95639 269 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 PMS2P2O95744 297 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 ROS1P08922 2347 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 OR12D1P0DN82 309 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 PGM1P36871 562 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 DIO1P49895 249 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 ATP5J2P56134 94 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 RPS26P62854 115 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 ZSWIM7Q19AV6 140 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 TIMM23BQ5SRD1 257 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 ZNF100Q8IYN0 542 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 ARFGAP2Q8N6H7 521 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 GLB1L3Q8NCI6 653 aaPredicted RBP12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 FAM71CQ8NEG0 241 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 PIGXQ8TBF5 258 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 PIWIL2Q8TC59 973 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 PKNOX2Q96KN3 472 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 CCDC115Q96NT0 180 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 TRNT1Q96Q11 434 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 KCNK9Q9NPC2 374 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 MARCOQ9UEW3 520 aaPredicted RBP12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 CHRNA9Q9UGM1 479 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 MGAT4BQ9UQ53 548 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 TRAPPC4Q9Y296 219 aa12.07□□□□□ -0.48
CCHCR1-227ENST00000508852 FREM1Q5H8C1 2179 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 IGKV3D-15A0A087WSY6 115 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 A0A1W2PNR3 127 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 SMAD9O15198 467 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 EIF1BO60739 113 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 TFPIP10646 304 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 IDUAP35475 653 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 KCNJ10P78508 379 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 PPP2R2BQ00005 443 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 PPA1Q15181 289 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 TAB1Q15750 504 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 NDUFAF6Q330K2 333 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 GPAT3Q53EU6 434 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 HHATQ5VTY9 493 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 TYW3Q6IPR3 259 aaKnown RBP12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 ZNF440Q8IYI8 595 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 RAB3IL1Q8TBN0 382 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 NUDT8Q8WV74 236 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 DDIT4LQ96D03 193 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 PPP1R36Q96LQ0 422 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 KLHDC3Q9BQ90 382 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 SLC35A5Q9BS91 424 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 NUF2Q9BZD4 464 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 GRIP2Q9C0E4 1043 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 CENPHQ9H3R5 247 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 SERHL2Q9H4I8 314 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 MTHFD2LQ9H903 347 aaPredicted RBP12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 BARX1Q9HBU1 254 aaPredicted RBP12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 PARPBPQ9NWS1 579 aa12.06□□□□□ -0.48
CCHCR1-227ENST00000508852 ZNF814B7Z6K7 855 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 FAAHO00519 579 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 CLOCKO15516 846 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 ZNF208O43345 1280 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 KRT75O95678 551 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 LY6G6DO95868 133 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 GGT1P19440 569 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 COX5AP20674 150 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 FAM174BQ3ZCQ3 159 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 TNFAIP8L3Q5GJ75 292 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 SPANXN4Q5MJ08 99 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 FBXW9Q5XUX1 488 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 ATG16L1Q676U5 607 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 ABLIM2Q6H8Q1 611 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 OR7E24Q6IFN5 339 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 TNFAIP8L2Q6P589 184 aaPredicted RBP12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 KLHL17Q6TDP4 642 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 LRRC74BQ6ZQY2 392 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 ANKRD46Q86W74 232 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 SMAP2Q8WU79 429 aaPredicted RBP12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 PANX1Q96RD7 426 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 SORT1Q99523 831 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 SMR3AQ99954 134 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 NAA11Q9BSU3 229 aaPredicted RBP12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 CCDC106Q9BWC9 280 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 PARD6BQ9BYG5 372 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 ALG2Q9H553 416 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 THAP1Q9NVV9 213 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 THUMPD1Q9NXG2 353 aaKnown RBP12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 CALML5Q9NZT1 146 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 LAMP3Q9UQV4 416 aa12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
CCHCR1-227ENST00000508852 IGHV3-15A0A0B4J1V0 119 aa12.04□□□□□ -0.48
CCHCR1-227ENST00000508852 A0A1W2PP18 115 aa12.04□□□□□ -0.48
CCHCR1-227ENST00000508852 CCDC154A6NI56 674 aa12.04□□□□□ -0.48
CCHCR1-227ENST00000508852 OVOL3O00110 214 aa12.04□□□□□ -0.48
CCHCR1-227ENST00000508852 HDAC3O15379 428 aa12.04□□□□□ -0.48
CCHCR1-227ENST00000508852 PGM3O95394 542 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms