RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 LINC00242Q5T6M2 205 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 DDI2Q5TDH0 399 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 MFSD14CQ5VZR4 134 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 PMF1Q6P1K2 205 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 FAM43BQ6ZT52 329 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 CENPUQ71F23 418 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 STRADAQ7RTN6 431 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 ACOT1Q86TX2 421 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 SERINC5Q86VE9 423 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 FAM228AQ86W67 206 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 HIPK1Q86Z02 1210 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 TMEM86AQ8N2M4 240 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 C12orf29Q8N999 325 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 OR6T1Q8NGN1 323 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 ACTL9Q8TC94 416 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 C18orf25Q96B23 403 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 SLCO4A1Q96BD0 722 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 FAF2Q96CS3 445 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 RNF157Q96PX1 679 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 ZNF670Q9BS34 389 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 ST6GALNAC5Q9BVH7 336 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 FUNDC2Q9BWH2 189 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 CXCL16Q9H2A7 254 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 NXF3Q9H4D5 531 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 Q9HAA7 133 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 MID1IP1Q9NPA3 183 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 PRMT8Q9NR22 394 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 NINJ2Q9NZG7 142 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 RCOR3Q9P2K3 495 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 TUBGCP4Q9UGJ1 667 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 TP53TG3Q9ULZ0 132 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 SNX5Q9Y5X3 404 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 NUP205Q92621 2012 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 TANC1Q9C0D5 1861 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 FER1L5A0AVI2 2057 aa4.49□□□□□ -1.69
UBE2D3-217ENST00000504211 NDUFAB1O14561 156 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 MCF2LO15068 1137 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 CYBAP13498 195 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 HPDP32754 393 aaPredicted RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 RPL22P35268 128 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 MAGEA6P43360 314 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 AIF1P55008 147 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 CDH6P55285 790 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 EIF3EP60228 445 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 MGAT3Q09327 533 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 LASP1Q14847 261 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 EXOSC7Q15024 291 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 TRIP13Q15645 432 aaPredicted RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 DPYSL2Q16555 572 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 HAGHQ16775 308 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 TWF2Q6IBS0 349 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 BZW1Q7L1Q6 419 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 BNIPLQ7Z465 357 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 CNPY4Q8N129 248 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 TRPV1Q8NER1 839 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 RDH11Q8TC12 318 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 ST7LQ8TDW4 575 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 FAM172AQ8WUF8 416 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 P3H4Q92791 437 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 NT5C3BQ969T7 300 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 HAUS1Q96CS2 278 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 GPR137Q96N19 417 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 XPO6Q96QU8 1125 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 PEBP4Q96S96 227 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 CCT8L2Q96SF2 557 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 TMEM121Q9BTD3 319 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 DUSP16Q9BY84 665 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 AMBNQ9NP70 447 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 EURLQ9NYK6 297 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 SENP1Q9P0U3 644 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 EIF3KQ9UBQ5 218 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 CIDEBQ9UHD4 219 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 PCSK1NQ9UHG2 260 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 ZNF107Q9UII5 783 aaPredicted RBP4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 GINS2Q9Y248 185 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 HES2Q9Y543 173 aa4.48□□□□□ -1.69
UBE2D3-217ENST00000504211 SF3B1O75533 1304 aaKnown RBP eCLIP4.47□□□□□ -1.692e-6■■■■■ 59.2
UBE2D3-217ENST00000504211 NYNRINQ9P2P1 1898 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 CHD5Q8TDI0 1954 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 MYLKQ15746 1914 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 DENND4CQ5VZ89 1909 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 HACD1B0YJ81 288 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 CYB561D2O14569 222 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 CHADO15335 359 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 SPAG6O75602 509 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 CABYRO75952 493 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 CHRNA1P02708 482 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 MBL2P11226 248 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 ETS1P14921 441 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 UGT1A6P19224 532 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 PHBP35232 272 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 NPRL3Q12980 569 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 RPA4Q13156 261 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 TSTA3Q13630 321 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 KLF5Q13887 457 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 Q1RN00 199 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 KLHL38Q2WGJ6 581 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 SLC25A52Q3SY17 297 aa4.47□□□□□ -1.69
UBE2D3-217ENST00000504211 NKAIN2Q5VXU1 208 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms