RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 HOXC4P09017 264 aaPredicted RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 H2BFMP0C1H6 154 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 EPB41P11171 864 aaKnown RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 KRT13P13646 458 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 HTR1EP28566 365 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 LEPP41159 167 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 PTGDSP41222 190 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 AP3M2P53677 418 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 CSNK1G2P78368 415 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 MECOMQ03112 1051 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 CHRNB3Q05901 458 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 CCDC173Q0VFZ6 552 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ZNF658BQ4V348 819 aaPredicted RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 KLF17Q5JT82 389 aaPredicted RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 RIPPLY2Q5TAB7 128 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ATL3Q6DD88 541 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 CCDC137Q6PK04 289 aaKnown RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 RFLNAQ6ZTI6 216 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ARCQ7LC44 396 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ACOT1Q86TX2 421 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 C6orf223Q8N319 242 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 CLDN19Q8N6F1 224 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 OR4D9Q8NGE8 314 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 OR2T34Q8NGX1 318 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 IL22RA2Q969J5 263 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 PELI1Q96FA3 418 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 CCNL2Q96S94 520 aaPredicted RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 RIT2Q99578 217 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 GAL3ST1Q99999 423 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 NXF5Q9H1B4 397 aaKnown RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ZNF385DQ9H6B1 395 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 NARFLQ9H6Q4 476 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 NANOGQ9H9S0 305 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ELOVL3Q9HB03 270 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 PALMDQ9NP74 551 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ZNF331Q9NQX6 463 aaPredicted RBP2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 KIF25Q9UIL4 384 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 RASD1Q9Y272 281 aa2.72□□□□□ -1.97
CDC42SE2-204ENST00000502639 ARID1AO14497 2285 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 ARHGAP21Q5T5U3 1957 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 A0A1W2PNV4 684 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 TMEM110-MUSTN1A8MSY1 372 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 A8MUA0 341 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 BCAS1O75363 584 aaPredicted RBP2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 MFN2O95140 757 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 RBMY1CP0DJD4 496 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 PSG2P11465 335 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 ACAA2P42765 397 aaKnown RBP2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 P2RY1P47900 373 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 HNRNPA3P51991 378 aaKnown RBP2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 ZNF763Q0D2J5 394 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 SELPLGQ14242 412 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 NSUN5P1Q3KNT7 163 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 DNAJC21Q5F1R6 531 aaKnown RBP2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 Q6P435 159 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 BLOC1S2Q6QNY1 142 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 TMEM110Q86TL2 294 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 ZDHHC21Q8IVQ6 265 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 GPATCH11Q8N954 259 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 OR10A7Q8NGE5 316 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 SLC35A5Q9BS91 424 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 SLC17A5Q9NRA2 495 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 MMP26Q9NRE1 261 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 IL36GQ9NZH8 169 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 AIPL1Q9NZN9 384 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 AK6Q9Y3D8 172 aaKnown RBP2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 NEUROG3Q9Y4Z2 214 aa2.71□□□□□ -1.98
CDC42SE2-204ENST00000502639 A0A0G2JLM5 398 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 NPIPA7E9PJI5 369 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 XPO1O14980 1071 aaKnown RBP2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 RTL8CO15255 209 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 SNAPINO95295 136 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 IGHG4P01861 327 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 KRT8P05787 483 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 NPIPA8P0DM63 369 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 RCC1P18754 421 aaPredicted RBP2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 MMP11P24347 488 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 NUDT1P36639 197 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 RPS10P46783 165 aaKnown RBP2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 UCNP55089 124 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 TIMM10P62072 90 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 SNTB2Q13425 540 aaKnown RBP2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 SLC25A52Q3SY17 297 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 PAGE3Q5JUK9 113 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 CASC10Q5T4H9 136 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 CES3Q6UWW8 571 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 RNF165Q6ZSG1 346 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 OR2L13Q8N349 312 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 NKAPP1Q8N9T2 125 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 SRSF12Q8WXF0 261 aaKnown RBP2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 C16orf45Q96MC5 204 aaPredicted RBP2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 MBOAT4Q96T53 435 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 NRTNQ99748 197 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 EDEM2Q9BV94 578 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 SPATA16Q9BXB7 569 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 SMYD3Q9H7B4 428 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 APMAPQ9HDC9 416 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 RAB18Q9NP72 206 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 PRO0461Q9UI25 63 aa2.7□□□□□ -1.98
CDC42SE2-204ENST00000502639 NPIPA1Q9UND3 350 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms