RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 OAFQ86UD1 273 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 C9orf43Q8TAL5 461 aaPredicted RBP9.53□□□□□ -0.88
SAMM50-206ENST00000494795 SLC2A12Q8TD20 617 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ZNF721Q8TF20 911 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 C1GALT1C1Q96EU7 318 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 MOGAT1Q96PD6 335 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ANKRD19PQ9H560 264 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 KLHL1Q9NR64 748 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 FGF21Q9NSA1 209 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 DAPK2Q9UIK4 370 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 MED31Q9Y3C7 131 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 GRIP1Q9Y3R0 1128 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 IGKV1D-42A0A075B6H8 117 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 CD8B2A6NJW9 211 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 C12orf71A8MTZ7 269 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 PSMD9O00233 223 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ICOSLGO75144 302 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 OCM2P0CE71 109 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 OCMP0CE72 109 aaPredicted RBP9.53□□□□□ -0.88
SAMM50-206ENST00000494795 CD8BP10966 210 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 HIST1H1CP16403 213 aaKnown RBP9.53□□□□□ -0.88
SAMM50-206ENST00000494795 AZGP1P25311 298 aaKnown RBP9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ATP6V1E1P36543 226 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ARL4DP49703 201 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ATP12AP54707 1039 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 GARNL3Q5VVW2 1013 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 STEAP3Q658P3 488 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ZCCHC12Q6PEW1 402 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 LINC00471Q8N535 108 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 DTX3Q8N9I9 347 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 PHOSPHO1Q8TCT1 267 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 ATOH1Q92858 354 aaPredicted RBP9.53□□□□□ -0.88
SAMM50-206ENST00000494795 TSSK2Q96PF2 358 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 DPYSL5Q9BPU6 564 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 VN1R1Q9GZP7 353 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 DUSP15Q9H1R2 295 aaPredicted RBP9.53□□□□□ -0.88
SAMM50-206ENST00000494795 TMEM27Q9HBJ8 222 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 HMG20AQ9NP66 347 aa9.53□□□□□ -0.88
SAMM50-206ENST00000494795 SERINC4A6NH21 518 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 CHP2O43745 196 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 IFNA8P32881 189 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 HSD17B7P56937 341 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 RPS7P62081 194 aaKnown RBP9.52□□□□□ -0.88
SAMM50-206ENST00000494795 RAB40BQ12829 278 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 NIPAL3Q6P499 406 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 BMP8AQ7Z5Y6 402 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 CROCCP3Q8IVE0 287 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 DEFB123Q8N688 67 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 ZNF501Q96CX3 271 aaPredicted RBP9.52□□□□□ -0.88
SAMM50-206ENST00000494795 ELF4Q99607 663 aaPredicted RBP9.52□□□□□ -0.88
SAMM50-206ENST00000494795 ARHGAP9Q9BRR9 750 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 ZNF426Q9BUY5 554 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 MRPS33Q9Y291 106 aaKnown RBP9.52□□□□□ -0.88
SAMM50-206ENST00000494795 TECTAO75443 2155 aa9.52□□□□□ -0.88
SAMM50-206ENST00000494795 IGKV3D-11A0A0A0MRZ8 115 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 CCDC182A6NF36 153 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 RGS5O15539 181 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 NUDT21O43809 227 aaKnown RBP9.52□□□□□ -0.89
SAMM50-206ENST00000494795 IMPDH2P12268 514 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 GLB1P16278 677 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 MYL12AP19105 171 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 NUDT1P36639 197 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 NR0B1P51843 470 aaKnown RBP9.52□□□□□ -0.89
SAMM50-206ENST00000494795 E2F1Q01094 437 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 MLLT11Q13015 90 aaPredicted RBP9.52□□□□□ -0.89
SAMM50-206ENST00000494795 ZNF141Q15928 474 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 C3orf38Q5JPI3 329 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 MARCH3Q86UD3 253 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 SLC22A16Q86VW1 577 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 NR2C2APQ86WQ0 139 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 OR13C5Q8NGS8 318 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 BRIX1Q8TDN6 353 aaKnown RBP9.52□□□□□ -0.89
SAMM50-206ENST00000494795 HTRA1Q92743 480 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 C3orf49Q96BT1 292 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 RASD2Q96D21 266 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 ZMYND19Q96E35 227 aaPredicted RBP9.52□□□□□ -0.89
SAMM50-206ENST00000494795 DEPDC7Q96QD5 511 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 CTRCQ99895 268 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 BCL7BQ9BQE9 202 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 NXF2Q9GZY0 626 aaKnown RBP9.52□□□□□ -0.89
SAMM50-206ENST00000494795 UCK1Q9HA47 277 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 FGF20Q9NP95 211 aaPredicted RBP9.52□□□□□ -0.89
SAMM50-206ENST00000494795 PCDHGB7Q9Y5F8 929 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 KIF26BQ2KJY2 2108 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 J3QRE1 110 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 IGKV3-11P04433 115 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 TSPAN19P0C672 248 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 CPEP16870 476 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 GRPRP30550 384 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 EGR4Q05215 589 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 LTBQ06643 244 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 RGS21Q2M5E4 152 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 KLHL26Q53HC5 615 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 NXNL2Q5VZ03 156 aa9.52□□□□□ -0.89
SAMM50-206ENST00000494795 LINC00114Q6XXX2 140 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms