RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GPR19Q15760 415 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 NHSL2Q5HYW2 709 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 GPR157Q5UAW9 335 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 KCTD20Q7Z5Y7 419 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 LRRC56Q8IYG6 542 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-207ENST00000494090 RSC1A1Q92681 617 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 POLHQ9Y253 713 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
COL27A1-207ENST00000494090 PLSCR5A0PG75 271 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 PEX14O75381 377 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 IGHG1P01857 330 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 AADACL4Q5VUY2 407 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 SBSNQ6UWP8 590 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 BRIX1Q8TDN6 353 aaKnown RBP17.9■□□□□ 0.46
COL27A1-207ENST00000494090 SLC25A18Q9H1K4 315 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 CXCL16Q9H2A7 254 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 CUTCQ9NTM9 273 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 GMPR2Q9P2T1 348 aaKnown RBP17.9■□□□□ 0.46
COL27A1-207ENST00000494090 PSORS1C1Q9UIG5 152 aa17.9■□□□□ 0.46
COL27A1-207ENST00000494090 AHDC1Q5TGY3 1603 aaPredicted RBP17.89■□□□□ 0.46
COL27A1-207ENST00000494090 IMPA1P29218 277 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 GK2Q14410 553 aaPredicted RBP17.89■□□□□ 0.45
COL27A1-207ENST00000494090 RPE65Q16518 533 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 NXPE3Q969Y0 559 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 AP1S3Q96PC3 154 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 MAN2C1Q9NTJ4 1040 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 MED17Q9NVC6 651 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 A0A0A6YYH2 397 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 TRBV4-1A0A0J9YWV2 114 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 TRBV11-1A0A0K0K1C0 115 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 A6NJ64 397 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 ARPC1BO15143 372 aaKnown RBP17.89■□□□□ 0.45
COL27A1-207ENST00000494090 CYB5BO43169 146 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 FBXO45P0C2W1 286 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 PSMB10P40306 273 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 EEF1A1P68104 462 aaKnown RBP17.89■□□□□ 0.45
COL27A1-207ENST00000494090 POC1BQ8TC44 478 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 AMDHD1Q96NU7 426 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 ADOQ96SZ5 270 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 TP53TG5Q9Y2B4 290 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 MYH4Q9Y623 1939 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 IGLV3-10A0A075B6K4 115 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 DCDC2BA2VCK2 349 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 BCAT2O15382 392 aaPredicted RBP17.89■□□□□ 0.45
COL27A1-207ENST00000494090 ARPC5O15511 151 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 RAB38P57729 211 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 COL9A2Q14055 689 aaPredicted RBP17.89■□□□□ 0.45
COL27A1-207ENST00000494090 MISPQ8IVT2 679 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 OR2A12Q8NGT7 310 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 TRAV27A0A087WT01 109 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 SSX5O60225 188 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 CTHP32929 405 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 LPAL2Q16609 132 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 KLHDC9Q8NEP7 349 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 OR56B2PQ8NGI1 322 aa17.89■□□□□ 0.45
COL27A1-207ENST00000494090 NKPD1Q17RQ9 610 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 OR14K1Q8NGZ2 314 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 NXT1Q9UKK6 140 aaKnown RBP17.88■□□□□ 0.45
COL27A1-207ENST00000494090 ZNF736B4DX44 427 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-207ENST00000494090 PTGER1P34995 402 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 RAB5BP61020 215 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 ADARB1P78563 741 aaKnown RBP17.88■□□□□ 0.45
COL27A1-207ENST00000494090 EXOSC7Q15024 291 aaKnown RBP17.88■□□□□ 0.45
COL27A1-207ENST00000494090 BCL7AQ4VC05 210 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 FAM26DQ5JW98 314 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 RNF113BQ8IZP6 322 aaKnown RBP17.88■□□□□ 0.45
COL27A1-207ENST00000494090 HRASLS5Q96KN8 279 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 SGCZQ96LD1 299 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 NGBQ9NPG2 151 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 KLK4Q9Y5K2 254 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 CTDSP2O14595 271 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 CHRNB4P30926 498 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 UBE2UQ5VVX9 321 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 Q6ZPB1 254 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-207ENST00000494090 SLCO4C1Q6ZQN7 724 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 MKXQ8IYA7 352 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 PRRT1Q99946 306 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 TMEM100Q9NV29 134 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 TAS2R20P59543 309 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 METAP1DQ6UB28 335 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-207ENST00000494090 FUNDC1Q8IVP5 155 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 OR4F15Q8NGB8 312 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 HLA-CQ95604 372 aa17.88■□□□□ 0.45
COL27A1-207ENST00000494090 ALS2Q96Q42 1657 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 GABRPO00591 440 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 GLSO94925 669 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-207ENST00000494090 BMP4P12644 408 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 ATP1B3P54709 279 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 PDE7AQ13946 482 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 ZNF322Q6U7Q0 402 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-207ENST00000494090 MMP21Q8N119 569 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 STARD5Q9NSY2 213 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 AP1G1O43747 822 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 AIFM1O95831 613 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 PKLRP30613 574 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 GABRA5P31644 462 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 LEXMQ3ZCV2 418 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 CCNJQ5T5M9 372 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 TECPR1Q7Z6L1 1165 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 STEAP2Q8NFT2 490 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms