RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SLC6A7Q99884 636 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 SLC35A5Q9BS91 424 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 POLR2J2Q9GZM3 115 aaKnown RBP2.49□□□□□ -2.01
ITGB1-216ENST00000493758 POLR2J3Q9H1A7 115 aaKnown RBP2.49□□□□□ -2.01
ITGB1-216ENST00000493758 PLGRKTQ9HBL7 147 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 MTRF1LQ9UGC7 380 aaKnown RBP2.49□□□□□ -2.01
ITGB1-216ENST00000493758 KIF25Q9UIL4 384 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 ASF1AQ9Y294 204 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 GSTK1Q9Y2Q3 226 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 CLCA3PQ9Y6N3 262 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 U3KQV3 271 aa2.49□□□□□ -2.01
ITGB1-216ENST00000493758 IGKV2D-24A0A075B6R9 120 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 GSAPA4D1B5 854 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 LRCOL1A6NCL2 159 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 A6NDX4 124 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 E7ESA3 106 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 DLGAP1O14490 977 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 PCCAP05165 728 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-216ENST00000493758 ADRB3P13945 408 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 HNRNPA2B1P22626 353 aaKnown RBP2.48□□□□□ -2.01
ITGB1-216ENST00000493758 TFPI2P48307 235 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 SUCLG1P53597 346 aaKnown RBP2.48□□□□□ -2.01
ITGB1-216ENST00000493758 PAX5Q02548 391 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 ZNF763Q0D2J5 394 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 RIPK1Q13546 671 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 C1orf100Q5SVJ3 147 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 C12orf60Q5U649 245 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 GDPD3Q7L5L3 318 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 LINC01551Q86U37 167 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 SAXO1Q8IYX7 474 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 Q8N9W7 124 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 OR10A7Q8NGE5 316 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 PNPT1Q8TCS8 783 aaKnown RBP2.48□□□□□ -2.01
ITGB1-216ENST00000493758 TCTEX1D2Q8WW35 142 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 PGLYRP4Q96LB8 373 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 SCRT1Q9BWW7 348 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 GSDMCQ9BYG8 508 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 C1orf21Q9H246 121 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 RHOJQ9H4E5 214 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 WDR76Q9H967 626 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 SMPD3Q9NY59 655 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-216ENST00000493758 TBK1Q9UHD2 729 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 PRPF19Q9UMS4 504 aaKnown RBP2.48□□□□□ -2.01
ITGB1-216ENST00000493758 PSG11Q9UQ72 335 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 RLFQ13129 1914 aa2.48□□□□□ -2.01
ITGB1-216ENST00000493758 TTC21BQ7Z4L5 1316 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 MTCL1Q9Y4B5 1905 aaKnown RBP2.47□□□□□ -2.01
ITGB1-216ENST00000493758 IGLV4-69A0A075B6H9 119 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 FCN1O00602 326 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 TNNI3P19429 210 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 ADSSP30520 456 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 CAMLGP49069 296 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 GMFBP60983 142 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 UNC119Q13432 240 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 EIF4EBP1Q13541 118 aaPredicted RBP2.47□□□□□ -2.01
ITGB1-216ENST00000493758 MAPK6Q16659 721 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 TMEM41BQ5BJD5 291 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 DNAJC21Q5F1R6 531 aaKnown RBP2.47□□□□□ -2.01
ITGB1-216ENST00000493758 TMEM255AQ5JRV8 349 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 FAM71F2Q6NXP2 309 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 CCDC137Q6PK04 289 aaKnown RBP2.47□□□□□ -2.01
ITGB1-216ENST00000493758 ACOT7LQ6ZUV0 252 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 TPRA1Q86W33 373 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 TPRX1Q8N7U7 411 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 OR56B4Q8NH76 319 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 OR6X1Q8NH79 312 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 SELENOMQ8WWX9 145 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 PIGCQ92535 297 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 RNF185Q96GF1 192 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 ZNF670Q9BS34 389 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 OR11A1Q9GZK7 315 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 RHBGQ9H310 441 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 NUFIP1Q9UHK0 495 aaKnown RBP2.47□□□□□ -2.01
ITGB1-216ENST00000493758 ERVW-1Q9UQF0 538 aa2.47□□□□□ -2.01
ITGB1-216ENST00000493758 ATP10DQ9P241 1426 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 IGHV1OR21-1A0A087WYE8 117 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 PES1O00541 588 aaKnown RBP2.46□□□□□ -2.02
ITGB1-216ENST00000493758 RIPK2O43353 540 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 PRPSAP2O60256 369 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 PTBP3O95758 552 aaKnown RBP2.46□□□□□ -2.02
ITGB1-216ENST00000493758 LGI1O95970 557 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 IGHG4P01861 327 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 ZNF44P15621 663 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 GAP43P17677 238 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 YWHABP31946 246 aaKnown RBP2.46□□□□□ -2.02
ITGB1-216ENST00000493758 LEPP41159 167 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 PTGDSP41222 190 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 AP3M2P53677 418 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 SH3BGRP55822 239 aaPredicted RBP2.46□□□□□ -2.02
ITGB1-216ENST00000493758 HSD17B7P56937 341 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 EWSR1Q01844 656 aaKnown RBP eCLIP2.46□□□□□ -2.02
ITGB1-216ENST00000493758 SCGB2A2Q13296 93 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 TSPO2Q5TGU0 170 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 PRSS41Q7RTY9 318 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 ERASQ7Z444 233 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 PNKDQ8N490 385 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 CLDN19Q8N6F1 224 aa2.46□□□□□ -2.02
ITGB1-216ENST00000493758 KIR3DL3Q8N743 410 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms