RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 TCTN3Q6NUS6 607 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 FAHD1Q6P587 224 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 PAPD4Q6PIY7 484 aaKnown RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 UGT2A3Q6UWM9 527 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ZNF730Q6ZMV8 503 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ZNF550Q7Z398 422 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 CPEB2Q7Z5Q1 589 aaKnown RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 TSEN54Q7Z6J9 526 aaKnown RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 RBM45Q8IUH3 476 aaKnown RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 LIX1LQ8IVB5 337 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ZNF440Q8IYI8 595 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 SLC34A3Q8N130 599 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 CLIP4Q8N3C7 705 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 SLC5A8Q8N695 610 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 TMCO5AQ8N6Q1 288 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ZNF321PQ8N8H1 164 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 SLC38A9Q8NBW4 561 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 PRSS33Q8NF86 280 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 B3GNT7Q8NFL0 401 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 TOR1AIP2Q8NFQ8 470 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 OR4N2Q8NGD1 307 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 OR9Q2Q8NGE9 314 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 OR4D11Q8NGI4 311 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 EFHD2Q96C19 240 aaPredicted RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 VMP1Q96GC9 406 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 LIN37Q96GY3 246 aaPredicted RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 SLC41A3Q96GZ6 507 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 FEVQ99581 238 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ZNF559Q9BR84 538 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 DDA1Q9BW61 102 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 NUDT9Q9BW91 350 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 WDR12Q9GZL7 423 aaKnown RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 WWTR1Q9GZV5 400 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ANKRD19PQ9H560 264 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 NMNAT1Q9HAN9 279 aaPredicted RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 TMEM27Q9HBJ8 222 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 BATF3Q9NR55 127 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 CTPS2Q9NRF8 586 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 SLC22A11Q9NSA0 550 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ACER3Q9NUN7 267 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 FBXO34Q9NWN3 711 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 FAM118AQ9NWS6 357 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 RPS6KB2Q9UBS0 482 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 ACAD8Q9UKU7 415 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 A4GNTQ9UNA3 340 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 SLC35A3Q9Y2D2 325 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 MYRFQ9Y2G1 1151 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 PTRH2Q9Y3E5 179 aaKnown RBP6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 GMPPBQ9Y5P6 360 aa6.18□□□□□ -1.42
NCKAP1-207ENST00000493359 IGHV3-20A0A0C4DH32 117 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TRBV4-1A0A0J9YWV2 114 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TRBV11-1A0A0K0K1C0 115 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CENPVL1A0A0U1RR11 272 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 A0A1W2PRQ8 180 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TRAPPC13A5PLN9 417 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CDHR4A6H8M9 788 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 SERINC4A6NH21 518 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CLDN24A6NM45 220 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 GTPBP1O00178 669 aaKnown RBP6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 DLGAP1O14490 977 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TPST2O60704 377 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 FMO6PO60774 539 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 REM1O75628 298 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 STK17BO94768 372 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 UTS2O95399 124 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 EPPINO95925 133 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CSTAP01040 98 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 IGKV1D-16P01601 117 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 GNAO1P09471 354 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CT45A8P0DMV1 189 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CT45A9P0DMV2 189 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 GSTM3P21266 225 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 LIMS1P48059 325 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CLK3P49761 638 aaKnown RBP6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 NR0B1P51843 470 aaKnown RBP6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 HMGA2P52926 109 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TCF15Q12870 199 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 NPRL3Q12980 569 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TARDBPQ13148 414 aaKnown RBP eCLIP6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TOP3AQ13472 1001 aaPredicted RBP6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 BLMHQ13867 455 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 DGCR6Q14129 220 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 TRIP6Q15654 476 aaKnown RBP6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 NPTX1Q15818 432 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 ZNF141Q15928 474 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 MAPK14Q16539 360 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 CT45A2Q5DJT8 189 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 HES3Q5TGS1 186 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 STPG1Q5TH74 334 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 ZNF691Q5VV52 312 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 FAM198BQ6UWH4 519 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 DHRS13Q6UX07 377 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 HSDL2Q6YN16 418 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 COMTD1Q86VU5 262 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 C9orf40Q8IXQ3 194 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 C17orf47Q8NEP4 570 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 OR4K5Q8NGD3 323 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 OR5L2Q8NGL0 311 aa6.17□□□□□ -1.42
NCKAP1-207ENST00000493359 WDR36Q8NI36 951 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms