RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 PHF10Q8WUB8 498 aaKnown RBP14.39□□□□□ -0.11
HDAC7-224ENST00000488927 DNAJA4Q8WW22 397 aaPredicted RBP14.39□□□□□ -0.11
HDAC7-224ENST00000488927 SMPDL3BQ92485 455 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 KLHL15Q96M94 604 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 NPAS1Q99742 590 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 RSPO3Q9BXY4 272 aaPredicted RBP14.39□□□□□ -0.11
HDAC7-224ENST00000488927 CALHM2Q9HA72 323 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 C12orf10Q9HB07 376 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 TIGARQ9NQ88 270 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 CTPS2Q9NRF8 586 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 SELENONQ9NZV5 590 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 CHRNA9Q9UGM1 479 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 EGFL7Q9UHF1 273 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 SH3BGRL2Q9UJC5 107 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 SAMD4AQ9UPU9 718 aaKnown RBP14.39□□□□□ -0.11
HDAC7-224ENST00000488927 MEMO1Q9Y316 297 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 SH3GLB1Q9Y371 365 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 SNX13Q9Y5W8 968 aa14.39□□□□□ -0.11
HDAC7-224ENST00000488927 EBAG9O00559 213 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 ADAMDEC1O15204 470 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 LRRTM2O43300 516 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 SEC14L5O43304 696 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 ZNF208O43345 1280 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 ZNF682O95780 498 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 SERPINA1P01009 418 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 NCK1P16333 377 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 CXCR1P25024 350 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 SLC7A1P30825 629 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 ACSF3Q4G176 576 aaPredicted RBP14.38□□□□□ -0.11
HDAC7-224ENST00000488927 SWT1Q5T5J6 900 aaKnown RBP14.38□□□□□ -0.11
HDAC7-224ENST00000488927 ULK3Q6PHR2 472 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 GGNQ86UU5 652 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 COMTD1Q86VU5 262 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 LACC1Q8IV20 430 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 FAM156AQ8NDB6 213 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 POP5Q969H6 163 aaKnown RBP14.38□□□□□ -0.11
HDAC7-224ENST00000488927 ZNF524Q96C55 264 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 SLC7A6OSQ96CW6 309 aaPredicted RBP14.38□□□□□ -0.11
HDAC7-224ENST00000488927 DDIT4LQ96D03 193 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 TPD52L3Q96J77 140 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 UCN2Q96RP3 112 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 POLR2J2Q9GZM3 115 aaKnown RBP14.38□□□□□ -0.11
HDAC7-224ENST00000488927 POLR2J3Q9H1A7 115 aaKnown RBP14.38□□□□□ -0.11
HDAC7-224ENST00000488927 TMEM185BQ9H7F4 350 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 OSGIN1Q9UJX0 560 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 PACSIN3Q9UKS6 424 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 DNAJC13O75165 2243 aa14.38□□□□□ -0.11
HDAC7-224ENST00000488927 TMED7-TICAM2A0A0A6YYA0 188 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 CD8B2A6NJW9 211 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 PYCARD-AS1I3L0S3 204 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 M0R3H8 397 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 EIF1AYO14602 144 aaKnown RBP14.37□□□□□ -0.11
HDAC7-224ENST00000488927 EFNA2O43921 213 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 STAMBPO95630 424 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 PNMTP11086 282 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 IL11P20809 199 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 CLDN20P56880 219 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 HOXC5Q00444 222 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 ESPL1Q14674 2120 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 SGCBQ16585 318 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 TMEM176BQ3YBM2 270 aaPredicted RBP14.37□□□□□ -0.11
HDAC7-224ENST00000488927 SYT14P1Q58G82 188 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 MTX3Q5HYI7 312 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 NSUN5P2Q63ZY6 315 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 ZNF613Q6PF04 617 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 POMZP3Q6PJE2 187 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 FJX1Q86VR8 437 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 CARM1Q86X55 608 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 ADGRG3Q86Y34 549 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 ZGRF1Q86YA3 2104 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 OR6T1Q8NGN1 323 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 OR2V1Q8NHB1 315 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 GEMIN6Q8WXD5 167 aaKnown RBP14.37□□□□□ -0.11
HDAC7-224ENST00000488927 C3orf49Q96BT1 292 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 NSMCE2Q96MF7 247 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 MCHR1Q99705 422 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 TUBA1CQ9BQE3 449 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 THTPAQ9BU02 230 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 PCDHAC1Q9H158 963 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 DCAF13Q9NV06 445 aaKnown RBP14.37□□□□□ -0.11
HDAC7-224ENST00000488927 ACTR3BQ9P1U1 418 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 TMED7Q9Y3B3 224 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 HDGFL3Q9Y3E1 203 aa14.37□□□□□ -0.11
HDAC7-224ENST00000488927 A0A1B0GWA3 101 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 ARPC2O15144 300 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
HDAC7-224ENST00000488927 FCGR2AP12318 317 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 HTR2AP28223 471 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 IFNA8P32881 189 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 SFTPDP35247 375 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 EIF1AXP47813 144 aaKnown RBP14.36□□□□□ -0.11
HDAC7-224ENST00000488927 SUCLG1P53597 346 aaKnown RBP14.36□□□□□ -0.11
HDAC7-224ENST00000488927 CLDN15P56746 228 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 CARD18P57730 90 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 TRIM25Q14258 630 aaKnown RBP14.36□□□□□ -0.11
HDAC7-224ENST00000488927 OR1Q1Q15612 314 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 IFI44LQ53G44 452 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 ALG10BQ5I7T1 473 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 HBMQ6B0K9 141 aa14.36□□□□□ -0.11
HDAC7-224ENST00000488927 C5orf46Q6UWT4 87 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms