RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 Q96MT0 163 aa9.88□□□□□ -0.83
DDX56-212ENST00000485367 KCNC2Q96PR1 638 aa9.88□□□□□ -0.83
DDX56-212ENST00000485367 CHCHD6Q9BRQ6 235 aa9.88□□□□□ -0.83
DDX56-212ENST00000485367 MS4A8Q9BY19 250 aa9.88□□□□□ -0.83
DDX56-212ENST00000485367 DAPP1Q9UN19 280 aa9.88□□□□□ -0.83
DDX56-212ENST00000485367 MAPRE3Q9UPY8 281 aa9.88□□□□□ -0.83
DDX56-212ENST00000485367 CENPEQ02224 2701 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 IQCMA0A1B0GVH7 501 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 CCDC182A6NF36 153 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 TGFBR3LH3BV60 316 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 SAP18O00422 153 aaKnown RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 RTCAO00442 366 aaKnown RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 CYR61O00622 381 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 TGFB1P01137 390 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 IFNA16P05015 189 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 PIPP12273 146 aaPredicted RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 GABRB1P18505 474 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 CFL1P23528 166 aaKnown RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 ATP5A1P25705 553 aaKnown RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 EPHA2P29317 976 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 TDGF1P3P51864 188 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 PER3P56645 1201 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 MLF1P58340 268 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 DSTNP60981 165 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 TMEM35AQ53FP2 167 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 ZNF468Q5VIY5 522 aaPredicted RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 OR4F3Q6IEY1 312 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 GRHL2Q6ISB3 625 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 MYO7BQ6PIF6 2116 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 TMPRSS11AQ6ZMR5 421 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 ZNF595Q8IYB9 648 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 LAS2Q8IYD9 372 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 KRTCAP2Q8N6L1 136 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 HORMAD2Q8N7B1 307 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 LINC00469Q8N7U9 141 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 ACOT4Q8N9L9 421 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 SRFBP1Q8NEF9 429 aaKnown RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 THAP3Q8WTV1 239 aaPredicted RBP9.87□□□□□ -0.83
DDX56-212ENST00000485367 CMTM7Q96FZ5 175 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 HSH2DQ96JZ2 352 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 TAPBPLQ9BX59 468 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 ROGDIQ9GZN7 287 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 SLC6A13Q9NSD5 602 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 LRFN1Q9P244 771 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 SEC14L3Q9UDX4 400 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 FBXW2Q9UKT8 454 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 CORO2BQ9UQ03 480 aa9.87□□□□□ -0.83
DDX56-212ENST00000485367 SERTM1A2A2V5 107 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 hCG_2039718K7EN88 272 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 CTNSO60931 367 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 PDE9AO76083 593 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 PTHP01270 115 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 SP1P08047 785 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 PPIBP23284 216 aaKnown RBP9.86□□□□□ -0.83
DDX56-212ENST00000485367 CYB561P49447 251 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 RORCP51449 518 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 RUNX1T1Q06455 604 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 ST3GAL4Q11206 333 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 STX4Q12846 297 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 TNK1Q13470 666 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 LAPTM4AQ15012 233 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 GGTA1PQ4G0N0 100 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 IQCCQ4KMZ1 466 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 C1QL3Q5VWW1 255 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 KHDRBS2Q5VWX1 349 aaKnown RBP9.86□□□□□ -0.83
DDX56-212ENST00000485367 SLC25A25Q6KCM7 469 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 ZNF793Q6ZN11 406 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 MAMDC2Q7Z304 686 aaPredicted RBP9.86□□□□□ -0.83
DDX56-212ENST00000485367 KCTD20Q7Z5Y7 419 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 RNF175Q8N4F7 328 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 GDPD1Q8N9F7 314 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 TMEM178AQ8NBL3 297 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 NUDT8Q8WV74 236 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 SCMH1Q96GD3 660 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 METTL2AQ96IZ6 378 aaKnown RBP9.86□□□□□ -0.83
DDX56-212ENST00000485367 C7orf34Q96L11 122 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 HBEGFQ99075 208 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 MGLLQ99685 303 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 MAPKAP1Q9BPZ7 522 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 SRRQ9GZT4 340 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 OR51B5Q9H339 312 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 LIN7BQ9HAP6 207 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 LYRM4Q9HD34 91 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 C14orf119Q9NWQ9 140 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 ERVK13-1Q9NX77 482 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 KCMF1Q9P0J7 381 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 CLDN16Q9Y5I7 305 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 V9GYH0 126 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 SPACA6W5XKT8 324 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 A0A1B0GUH1 482 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 TRIM77I1YAP6 450 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 CLIC1O00299 241 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 SSX4O60224 188 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 NEURL1O76050 574 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 CLDN1O95832 211 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 LGI1O95970 557 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 STSP08842 583 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 TNNI3P19429 210 aa9.86□□□□□ -0.83
DDX56-212ENST00000485367 HIST1H1TP22492 207 aaPredicted RBP9.86□□□□□ -0.83
DDX56-212ENST00000485367 PTGS2P35354 604 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms