RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CDH15P55291 814 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 PDE7AQ13946 482 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 CBFBQ13951 182 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 SYT14P1Q58G82 188 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 CDC73Q6P1J9 531 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 DEF8Q6ZN54 512 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 SLC22A9Q8IVM8 553 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 RFWD2Q8NHY2 731 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 SLC25A43Q8WUT9 341 aaPredicted RBP17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 ST8SIA1Q92185 356 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 FAM120BQ96EK7 910 aaKnown RBP17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 METTL2AQ96IZ6 378 aaKnown RBP17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 OCEL1Q9H607 264 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 MID1IP1Q9NPA3 183 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 TMEM216Q9P0N5 145 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 ZNF180Q9UJW8 692 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 DTNAQ9Y4J8 743 aa17.67■□□□□ 0.42
PDLIM1-202ENST00000477757 ZNF264O43296 627 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 EIF4E2O60573 245 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 DNAJA2O60884 412 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 MRPL33O75394 65 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 UBL4AP11441 157 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 PCMT1P22061 227 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 SERPINF1P36955 418 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 ATP12AP54707 1039 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 LASP1Q14847 261 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 KIAA0040Q15053 153 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 DCST2Q5T1A1 773 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 RINLQ6ZS11 566 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 ZNF614Q8N883 585 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 OR52E4Q8NGH9 312 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 PIGXQ8TBF5 258 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 DCAKDQ8WVC6 231 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 CHMP6Q96FZ7 201 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 CCT7Q99832 543 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 REEP4Q9H6H4 257 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 RRAGDQ9NQL2 400 aaPredicted RBP17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 SIRT3Q9NTG7 399 aaPredicted RBP17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 ZCCHC3Q9NUD5 404 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 CCL27Q9Y4X3 112 aa17.66■□□□□ 0.42
PDLIM1-202ENST00000477757 LILRA1O75019 489 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 PDE5AO76074 875 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 STAMBPO95630 424 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 PRPH2P23942 346 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 PPOXP50336 477 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 DVL1P1P54792 670 aaPredicted RBP17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 RELL1Q8IUW5 271 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 ZHX1-C8orf76Q96EF9 292 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 KCNF1Q9H3M0 494 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 SERINC1Q9NRX5 453 aa17.65■□□□□ 0.42
PDLIM1-202ENST00000477757 B9A039 149 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 FAM157AC9JC47 383 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 AKAP10O43572 662 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 DNPH1O43598 174 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 SNUPNO95149 360 aaKnown RBP17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 SLU7O95391 586 aaKnown RBP17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 TGFBR3Q03167 851 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 MERTKQ12866 999 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 SKP2Q13309 424 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 EFNB3Q15768 340 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 C9orf135Q5VTT2 229 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 CASP12Q6UXS9 341 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 LCA5Q86VQ0 697 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 FCRL1Q96LA6 429 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 SNX18Q96RF0 628 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 PLK3Q9H4B4 646 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 METTL17Q9H7H0 456 aaPredicted RBP17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 CA10Q9NS85 328 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 SH3BP4Q9P0V3 963 aa17.64■□□□□ 0.41
PDLIM1-202ENST00000477757 TMEM89A2RUT3 159 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 SEC22BO75396 215 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 PMS2P2O95744 297 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 SDC1P18827 310 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 IDH3GP51553 393 aaPredicted RBP17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 SESN3P58005 492 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 PRPS1P60891 318 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 ADIPOQQ15848 244 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 KLHL24Q6TFL4 600 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 UGT2A3Q6UWM9 527 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 SPATA19Q7Z5L4 167 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 ACTRT3Q9BYD9 372 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 RAB1BQ9H0U4 201 aa17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 CDC42EP4Q9H3Q1 356 aaKnown RBP17.63■□□□□ 0.41
PDLIM1-202ENST00000477757 POC1B-GALNT4F8VUJ3 575 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 WNT11O96014 354 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 SNRPAP09012 282 aaKnown RBP17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 DAOP14920 347 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 EFNA1P20827 205 aaPredicted RBP17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 SCGB2A2Q13296 93 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 CCNYL1Q8N7R7 359 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 FAM216AQ8WUB2 273 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 TMEM234Q8WY98 164 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 GCDHQ92947 438 aaPredicted RBP17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 TSSK3Q96PN8 268 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 THUMPD3Q9BV44 507 aaKnown RBP17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 SLC7A10Q9NS82 523 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 ACER3Q9NUN7 267 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 C1orf109Q9NX04 203 aa17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 SPIN1Q9Y657 262 aaPredicted RBP17.62■□□□□ 0.41
PDLIM1-202ENST00000477757 KCNE3Q9Y6H6 103 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms