RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 IFI6P09912 130 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 LINC00032P0C843 101 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 ITGA2P17301 1181 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 DDX5P17844 614 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 RYKP34925 604 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 THBS2P35442 1172 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 MAP3K8P41279 467 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 NR4A2P43354 598 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 MAGEA8P43361 318 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 CCT3P49368 545 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 ATP12AP54707 1039 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 OR2B6P58173 313 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 RPS26P62854 115 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 GABRA6Q16445 453 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 KLHL26Q53HC5 615 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 SYT14P1Q58G82 188 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 OR7E24Q6IFN5 339 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 FRMD7Q6ZUT3 714 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 TRIM46Q7Z4K8 759 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 R3HCC1LQ7Z5L2 792 aaKnown RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 C17orf53Q8N3J3 647 aaPredicted RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 OR7A2PQ8NGA2 310 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 OR56A1Q8NGH5 318 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 OR52E4Q8NGH9 312 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 OR5D16Q8NGK9 328 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 OR5W2Q8NH69 310 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 PIGXQ8TBF5 258 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 AGR3Q8TD06 166 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 TMEM234Q8WY98 164 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 ZNF75CPQ92670 426 aaPredicted RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 C1orf159Q96HA4 380 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 FOXN4Q96NZ1 517 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 SORCS2Q96PQ0 1159 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 STACQ99469 402 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 CCT7Q99832 543 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 PRR14Q9BWN1 585 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 FUT8Q9BYC5 575 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 ACTRT3Q9BYD9 372 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 PLA2G12AQ9BZM1 189 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 DUSP22Q9NRW4 184 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 ACSS1Q9NUB1 689 aaPredicted RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 ING1Q9UK53 422 aaPredicted RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 MOKQ9UQ07 419 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 ACTL7BQ9Y614 415 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC25A15Q9Y619 301 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 SPIN1Q9Y657 262 aaPredicted RBP5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 KCNE3Q9Y6H6 103 aa5.86□□□□□ -1.47
RTFDC1-206ENST00000477485 LOC390937A0A1W2PQ73 354 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 SERINC4A6NH21 518 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 H3BQF6 201 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 NDUFS8O00217 210 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 GPR171O14626 319 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 KLF11O14901 512 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 AZIN1O14977 448 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 EIF4E2O60573 245 aaKnown RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 GLRA3O75311 464 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 KRT33AO76009 404 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 SNUPNO95149 360 aaKnown RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 SLU7O95391 586 aaKnown RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 C6orf47O95873 294 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 WNT11O96014 354 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ERCC1P07992 297 aaPredicted RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ITGA5P08648 1049 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 NEFHP12036 1026 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 PGCP20142 388 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 APEX1P27695 318 aaKnown RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ASMTP46597 345 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 FOXG1P55316 489 aaPredicted RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 SESN3P58005 492 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ACTG1P63261 375 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 LIPMQ5VYY2 423 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 DMRTA1Q5VZB9 504 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ABLIM2Q6H8Q1 611 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ZYG11AQ6WRX3 759 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 TMPPEQ6ZT21 453 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 OLIG3Q7RTU3 272 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 C16orf62Q7Z3J2 963 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 HMGN2P46Q86SG4 172 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 MTDHQ86UE4 582 aaKnown RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 LCA5Q86VQ0 697 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 LSRQ86X29 649 aaPredicted RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 CCDC103Q8IW40 242 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 RFLNBQ8N5W9 214 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 OR2T11Q8NH01 316 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ST8SIA1Q92185 356 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 HOXB13Q92826 284 aaPredicted RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 ZNF524Q96C55 264 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 OR7D2Q96RA2 312 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 SNX18Q96RF0 628 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 C1orf50Q9BV19 199 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 OR11A1Q9GZK7 315 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 BPESC1Q9GZL8 116 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 TNFRSF12AQ9NP84 129 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 SLC17A5Q9NRA2 495 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 CTPS2Q9NRF8 586 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 SIRT3Q9NTG7 399 aaPredicted RBP5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 GIMAP2Q9UG22 337 aa5.85□□□□□ -1.47
RTFDC1-206ENST00000477485 DCDC2Q9UHG0 476 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms