RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DCNP07585 359 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 TYRP1P17643 537 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 GABRB1P18505 474 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 GABRA3P34903 492 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SERPINF1P36955 418 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 MTNR1AP48039 350 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 GOLGA7Q7Z5G4 137 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 OR52B6Q8NGF0 335 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 OR5L2Q8NGL0 311 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ADAMTS19Q8TE59 1207 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 MR1Q95460 341 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF587Q96SQ5 575 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 MRI1Q9BV20 369 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CD244Q9BZW8 370 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CDH20Q9HBT6 801 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SLC6A14Q9UN76 642 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SCN9AQ15858 1988 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 XIRP1Q702N8 1843 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 A0A087WUU8 490 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 TRBV5-3A0A0A0MS03 114 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SLC43A1O75387 559 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 EOMESO95936 686 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 TFP02787 698 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 MAS1P04201 325 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ASGR2P07307 311 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ACSM4P0C7M7 580 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 RAB6AP20340 208 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 PRPH2P23942 346 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 APEX1P27695 318 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 VSX2P58304 361 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 FXYD4P59646 89 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 PLCXD2Q0VAA5 305 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 GPR155Q7Z3F1 870 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 TPRA1Q86W33 373 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 RAB39BQ96DA2 213 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CNN2Q99439 309 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 PIP5K1AQ99755 562 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF416Q9BWM5 594 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 DERL2Q9GZP9 239 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 MRPL15Q9P015 296 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 STUB1Q9UNE7 303 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 KIAA0100Q14667 2235 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 TSPAN11A1L157 253 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 F5H5P2 479 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 LCMT2O60294 686 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SLC2A5P22732 501 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 BDKRB1P46663 353 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 RAB5CP51148 216 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 DLX5P56178 289 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ID2Q02363 134 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CRYZQ08257 329 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 BCL2L15Q5TBC7 163 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SLC18B1Q6NT16 456 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 KIAA0907Q7Z7F0 614 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 OR4N5Q8IXE1 308 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 GATSQ8NAP1 163 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 OR7G3Q8NG95 312 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 OR13C3Q8NGS6 347 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 HAVCR2Q8TDQ0 301 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 HRASLS2Q9NWW9 162 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 IL36AQ9UHA7 158 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 RAB19A4D1S5 217 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 HLA-DQB1P01920 261 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CHATP28329 748 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CRYBB2P43320 205 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 DUSP3P51452 185 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ERVFC1P60507 584 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 CAMK2DQ13557 499 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 COL19A1Q14993 1142 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 FCN2Q15485 313 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF551Q7Z340 670 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 OR4D6Q8NGJ1 314 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 PXYLP1Q8TE99 480 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 NANOS1Q8WY41 292 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 MAL2Q969L2 176 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 STRADBQ9C0K7 418 aa10.81□□□□□ -0.68
U2AF1-209ENST00000475639 SIDT1Q9NXL6 827 aaKnown RBP10.81□□□□□ -0.68
U2AF1-209ENST00000475639 MTMR11A4FU01 709 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 CD8B2A6NJW9 211 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 GLOD5A6NK44 160 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 LYRM1O43325 122 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 MPIG6BO95866 241 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SYPP08247 313 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SNRNP70P08621 437 aaKnown RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 ALPIP09923 528 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 CD8BP10966 210 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 RNH1P13489 461 aaKnown RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 BPIP17213 487 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SSTR2P30874 369 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 RAB35Q15286 201 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 GDPGP1Q6ZNW5 385 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 CMIPQ8IY22 773 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 OR51Q1Q8NH59 317 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 OR1E3Q8WZA6 343 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 KLHDC7BQ96G42 594 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 GPR20Q99678 358 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 OCSTAMPQ9BR26 566 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 CDCA4Q9BXL8 241 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms